FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808190

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808190
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144211
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC91926.373993662064614No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA73355.086297161797644No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA72024.994071187357414No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC59024.09261429433261No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA41162.8541512089923793No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT39012.7050641074536617No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA36552.5344807261581987No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA35002.4269993273744723No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA32592.2598830879752585No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG31252.1669636851557783No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG24491.6982061007828806No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA23241.6115275533766495No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT21101.4631338802171818No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA19151.3279153462634612No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC14931.035288570220025No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG14340.9943762958442838No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG13800.9569311633647919No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT13400.9291940281947979No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA12430.8619314754075627No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11930.8272600564450702No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC11790.8175520591355722No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT11650.8078440618260743No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA11430.7925886374825777No Hit
CATAGATTGCCTCATTGTGCCAGACAGAAAAGGAATTAGAGCCAGTTCTG10890.7551435050030858No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC9890.6858006670781008No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT9650.6691583859761044No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG9490.6580635319081068No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT8340.5783192682943742No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGCTGGTGGTGCTGGAACT8090.5609835588131279No Hit
CATAGAGCATCCTCGTAATAGCAAACATTACGCTGACATCCCAACCACAC8060.5589032736753785No Hit
CATAGAAAAGTCACCATGCAGCCCTGATCTAGCTTCGGAATGTTTTCATC7880.5464215628488812No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG7590.5263121398506355No Hit
CATAGACCCACTTACACACACAGGTTTACACTGACGACAATGGGCACACT7450.5166041425411376No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT7420.5145238574033881No Hit
CATAGATTTGGCACTCACATACACGCCTCTTACCCCTTTACCTACCTTCT7270.5041224317146403No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT7080.49094729250889324No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6740.46737072761439835No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG6490.4500350181331521No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT6350.44032702082365427No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCCCTTTACCTACCTTCTCAGCTC5970.41397674241216No Hit
CATAGACCATGTAATACCATCGTGAGCAGACAATGGGCACACTTAACACC5940.4118964572744104No Hit
CATAGAGCACCCAACTATCCTTCAGCATCACCCCTTCTCCATCAGAGCAT5800.40218845996491254No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5660.3924804626554147No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT5630.3904001775176651No Hit
CATAGAAAAGTCACCATGCAGCCCTGAAAGTCACTCAAATATAGACCTCA5620.38970674913841524No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT5550.3848527504836663No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTCTCTTCCGCCTTTATC5430.3765316099326681No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5430.3765316099326681No Hit
CATAGACCCCCATGCAACCACATCTATAGGAAAATGTCAGTGGGCCATCT5240.36335647072692095No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT5190.3598893288306717No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA5070.35156818827967357No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT4880.3383930490739264No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTAGGGCAAGTGTATGGTCAGT4870.3376996206946765No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4860.3370061923154267No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTCTCTTCCGCCTTTATCCTTCTAT4850.3363127639361768No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC4820.3342324787984273No Hit
CATAGATCATGAATGACTCCCACTCTGTAGAGAAGGAAAATGTCAGTGGG4740.3286850517644285No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4590.3182836260756808No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTTGGGGGAAGAGAAACAGAAT4540.31481648417943153No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC4440.30788220038693304No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT4400.30510848686993364No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGTTCCAGCATGAGAAGAATG4390.3044150584906838No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAAAATGTCAGTGGGCCAT4310.298867631456685No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGGGAGGAACAGGGAGATG4280.29678734631893544No Hit
CATAGACAGAACACCACACCCCTGTCGTCAGTTTGGGGGAAGAGAAACAG4250.2947070611811859No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT4240.29401363280193604No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA4160.28846620576793724No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTCCAACTCTATAGATTATGCT4130.2863859206301877No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT4130.2863859206301877No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTAGAACAAGGGCATGGTCA4100.28430563549243815No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4100.28430563549243815No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA4060.28153192197543875No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4030.27945163683768925No Hit
CATAGATGCACCAGAAGCCACCTACCCCCTTTACCTACCTTCTCAGCTCT3970.2752910665621901No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGACGACAATGGGCACACTT3900.2704370679074412No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT3780.262115927356443No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGTGTGGGAGGAACAGGGAGATG3720.25795535708094386No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGTCACTCAAATATAGACC3710.25726192870169406No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG3640.2524079300469451No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGCCCTGTGATTGTCCTGGTCTAT3610.25032764490919557No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC3610.25032764490919557No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3520.24408678949594692No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3520.24408678949594692No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGATGACTTATGGAATCTGAAG3500.24269993273744722No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT3500.24269993273744722No Hit
CATAGATGCACCAGAAGCCACCTACCGTATGGGAGGAACAGGGAGATGTT3440.23853936246194812No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT3430.23784593408269827No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA3370.23368536380719918No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGAGGAACAGGGAGATGTT3320.23021822191094996No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTAGGAGTTCTGGCCCCTGTCT3180.22051022460145203No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTGGTCTATGAGTGCC3090.2142693691882034No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGGAAAATGTCAGTGGGCC2990.2073350853957049No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2910.2017876583617061No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA2900.20109422998245627No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA2840.19693365970695717No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2830.19624023132770735No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA2710.18791909077670912No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2640.18306509212196018No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC2520.17474395157096198No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2500.17335709481246228No Hit
CATAGATGGCATGTCACTTCCTCAGACTAGCCTCCCACAGCCCAGTTTTC2500.17335709481246228No Hit
CATAGATCTGGGAGGTGAAGAGGACAGTTCTATACAAGCACATTATTATT2470.17127680967471273No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG2460.17058338129546288No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGGTTTTCCGGCTTGAGGT2460.17058338129546288No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTCTGCTACCGTATGGGAGGAA2420.1678096677784635No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT2400.1664228110199638No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG2380.1650359542614641No Hit
CATAGATGCACCAGAAGCCACCTACCTCCCCTTTACCTACCTTCTCAGCT2350.16295566912371456No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA2300.1594885272274653No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTAGCCTTCTCTGATACCA2220.15394110019346652No Hit
CATAGAATTGCCTACTTTGGGACCCAAGGAAAATGTCAGTGGGCCATCTA2190.15186081505571697No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2170.15047395829721727No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT2120.14700681640096802No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGGGCATGGTCAAGTGTCTATGA2100.14561995964246832No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGGCAAGTGTATGGTCAGTTCTATG2050.14215281774621907No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGCACCCCCCAGTAGGGGCA1980.13729881909147015No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGGGCAAGTGTATGGTCAGTT1970.1366053907122203No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1970.1366053907122203No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC1960.13591196233297045No Hit
CATAGAGCATCCTCGTAATAGCAAACATTGTAGAACCATGAGGAATTAGA1930.1338316771952209No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA1920.13313824881597106No Hit
CATAGATGTCCCCATTCATCCTGCAACAAGGGCATGGTCAAGTGTCTATG1880.13036453529897163No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT1850.12828425016122208No Hit
CATAGACAGAACACCACACCCCTGTCCTTAGGAGTTCTGGCCCCTGTCTA1850.12828425016122208No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA1850.12828425016122208No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT1780.12343025150647316No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1760.12204339474797346No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGAGGAACAGGGAGATGTTCTATG1740.12065653798947376No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTGACGACATGGTTCTACACA1700.11788282447247435No Hit
CATAGAATTGCCTACTTTGGGACCCATTGTACAAACCAAACAATAGCCAG1690.1171893960932245No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGGAACAAGGGCATGGTCA1670.1158025393347248No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT1660.11510911095547498No Hit
CATAGATGGCATGTCACTTCCTCAGAGTAGCCTTCTCTGATACCATCCCT1650.11441568257622513No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCCTCGGTCCTGGATGCTCTCTCCT1620.11233539743847556No Hit
CATAGATCATGAATGACTCCCACTCTGGGTCCATTTTTGGTTCTCTTCTA1610.11164196905922572No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1550.10748139878372662No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGGTGGTCGGTTCTTAGGCTGCTC1550.10748139878372662No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCATCTGGGAGGAACAGGGAGAT1540.10678797040447677No Hit
CATAGACCCCCATGCAACCACATCTAAGGAAAATGTCAGTGGGCCATCTA1510.10470768526672722No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGGTGAAAAGTAGGGGACAGTT1480.10262740012897768No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)