FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808191

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808191
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144211
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG92206.393409656683609No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT73515.097392015865641No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT71894.985056618427166No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG53633.7188563979169413No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT39892.7660858048276484No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT38352.6592978344231715No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT35332.449882463889717No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT34382.3840067678609813No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT32592.2598830879752585No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG31302.170430827052028No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG24111.6718558223713864No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT22911.5886444168614047No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT22321.5477321424856634No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT18571.2876965002669698No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG14441.0013105796367823No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG13690.9493034511930435No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG13470.9340480268495469No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT13310.9229531727815493No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC12460.8640117605453121No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG12340.855690619994314No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT11370.7884280672070785No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT11100.7697055009673326No Hit
CATAGACTCAGAACTGGCTCTAATTCCTTTTCTGTCTGGCACAATGAGGC10800.7489026495898371No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC9840.6823335251818515No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9630.6677715292176047No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA8960.6213118278078649No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT8140.5644507007093773No Hit
CATAGAACTAGTTCCAGCACCACCAGCTCATAGACACTTGAAAGCTCCCT8110.5623704155716277No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGGGCTGCATGGTGACTTTTC7800.5408741358148824No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTAATGTTTGCTATTACGAGGATG7770.5387938506771328No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG7420.5145238574033881No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG7360.5103632871278889No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAAACCTGTGTGTGT7150.49580129116364213No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA7140.4951078627843923No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAAGAGGCGTGTATGTGAGTGC7070.4902538641296434No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC6910.4791590100616458No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT6490.4500350181331521No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG6380.44240730596140376No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC6180.4285387383764068No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGACACTTGAAAGCTCCCTGGATC5980.4146701707914098No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCTCACGATGGTATTACATGG5890.4084293153781612No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTTCAGGGCTGCATGGTGAC5650.39178703427616474No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5610.3890133207591654No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC5590.3876264640006657No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT5530.3834658937251666No Hit
CATAGAAGGGGTGATGCTCTGATGGAGAAGGGGTGATGCTGAAGGATAGT5470.3793053234496675No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT5430.3765316099326681No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTTGCAGGATGAATGGGGA5420.37583818155341825No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT5220.3619696139684213No Hit
CATAGATGGCCCACTGACATTTTCCTATAGATGTGGTTGCATGGGGGTCT5210.3612761855891714No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4930.34186019097017567No Hit
CATAGAACTGACCATACACTTGCCCTAAAGCAGCAAACAATTTCAGAAAG4870.3376996206946765No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT4810.3335390504191774No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTAACTTCGCCTGCCTTTCTCTAT4790.3321521936606777No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC4710.326604766626679No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4690.3252179098681793No Hit
CATAGATGGCCCACTGACATTTTCCTTCTCTACAGAGTGGGAGTCATTCA4600.3189770544549306No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAAGCAGCAAACAATTTCAGAAAGT4480.31065591390393243No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4420.30649534362843334No Hit
CATAGAGGCCATTCTTCTCATGCTGGAACTGGGTAGAATCTTGAACTCAG4400.30510848686993364No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC4360.30233477335293424No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTTTTACAAACTCAAGTGATT4330.3002544882151847No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACTGACGACAGGGGTGTGGTGTTC4310.298867631456685No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT4220.29262677604343634No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAAGCAGCAAACAATTTCAG4190.2905464909056868No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT4140.28707934900943755No Hit
CATAGAACATCTCCCTGTTCCTCCCATACGGTTGCAGGATGAATGGGGAC4130.2863859206301877No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC4120.28569249225093785No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGCAGCTCCTCTTCTCT4100.28430563549243815No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT4020.27875820845843935No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG3980.27598449494143995No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGTAGGTGGCTTCTGGTGCATCT3940.2732107814244406No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3900.2704370679074412No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA3890.2697436395281913No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT3760.26072907059794326No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTACATGTACACGGCA3760.26072907059794326No Hit
CATAGAACATCTCCCTGTTCCTCCCACACTGGATCTCAGAGTTAGCTTGC3670.25448821518469467No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC3610.25032764490919557No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC3600.24963421652994572No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT3580.24824735977144602No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTACGGTTGCAGGATGAATG3530.24478021787519674No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG3530.24478021787519674No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGGATCTCAGAGTTAGCTTGC3470.24061964759969767No Hit
CATAGAACATCTCCCTGTTCCTCCCATACGGTAGGTGGCTTCTGGTGCAT3460.23992621922044782No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT3450.23923279084119797No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT3390.23507222056569888No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAGCAGGGTTCTATGTGTAG3380.234378792186449No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA3340.2316050786694496No Hit
CATAGAACATCTCCCTGTTCCTCCCAAATGTTTGCTATTACGAGGATGCT3290.22813793677320038No Hit
CATAGACAGGGGCCAGAACTCCTAAGAAAGAAAACCCACAAAAGACGTCT3180.22051022460145203No Hit
CATAGACCAGGACAATCACAGGGCACTCATAGACCAGGACAATCACAGGG2990.2073350853957049No Hit
CATAGATGGCCCACTGACATTTTCCTTACGGTTGCAGGATGAATGGGGAC2950.2045613718787055No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2940.20386794349945567No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT2930.2031745151202058No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2750.19069280429370852No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2660.18445194888045988No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT2600.1802913786049608No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGAGGCTAGTCTGAGGAAGTGACAT2530.17543737995021183No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC2500.17335709481246228No Hit
CATAGAACCAACCAATAATAATGTGCTTGTATAGAACTGTCCTCTTCACC2480.17197023805396258No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTAGGATGAGATAATTGCC2420.1678096677784635No Hit
CATAGAACCTCAAGCCGGAAAACCTTACGGTTGCAGGATGAATGGGGACA2380.1650359542614641No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGAGGTAGGTGGCTTCTGGTGCAT2340.16226224074446471No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT2330.16156881236521486No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA2320.16087538398596501No Hit
CATAGAACATCTCCCTGTTCCTCCCATACGGTAGCAGAGACTGGGTCCCA2320.16087538398596501No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2310.16018195560671517No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT2300.1594885272274653No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACACTGAACGAAATTTAGGTGAG2220.15394110019346652No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2200.15255424343496682No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGGTCTCTATGTGTAGAACCATG2180.15116738667646712No Hit
CATAGATGGCCCACTGACATTTTCCTTGGGTCCCAAAGTAGGCAATTCTA2180.15116738667646712No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT2080.14423310288396862No Hit
CATAGAACTGACCATACACTTGCCCTGTCTAGGATGAGATAATTGCCCTT2010.13937910422921967No Hit
CATAGACGTGTGGTTGGGATGTCAGCCTGCCCCTACTGGGGGGTGCCTCC1980.13729881909147015No Hit
CATAGACACTTGACCATGCCCTTGTTGATTTAGGAAGCAGGGTTCTATGT1980.13729881909147015No Hit
CATAGAACTGACCATACACTTGCCCTCCCTCTACCAGCCTCAGTTCTATG1970.1366053907122203No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCATGGTTCTACAATGTTTGCTA1920.13313824881597106No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC1920.13313824881597106No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA1920.13313824881597106No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC1910.1324448204367212No Hit
CATAGACACTTGACCATGCCCTTGTTGCAGGATGAATGGGGACATCTATG1860.12897767854047193No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT1780.12343025150647316No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT1750.12134996636872361No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT1750.12134996636872361No Hit
CATAGAACATCTCCCTGTTCCTCCCAGGGCTGCATGGTGACTTTTCTATG1730.11996310961022391No Hit
CATAGACAGGGGCCAGAACTCCTAAGGACAGGGGTGTGGTGTTCTGTCTA1720.11926968123097406No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1720.11926968123097406No Hit
CATAGACACTTGACCATGCCCTTGTTCCTCATAGACACTTGAAAGCTCCC1670.1158025393347248No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACTCTGAGGAAGTGACATGCCAT1660.11510911095547498No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGGTGCGCAGGGAGGAGAGAGCATC1640.11372225419697528No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAGTGGGAGTCATTCATGATCTA1630.11302882581772543No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAATGGGTCCCAAAGTAGGCAAT1610.11164196905922572No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1610.11164196905922572No Hit
CATAGAACTAGTTCCAGCACCACCAGGCTTCATGGAGCAGCCTAAGAACC1590.11025511230072602No Hit
CATAGAACTGTCCCCTACTTTTCACCAGATGGGTCCCAAAGTAGGCAATT1500.10401425688747738No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT1490.10332082850822753No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA1480.10262740012897768No Hit
CATAGATGGCCCACTGACATTTTCCTTAGATGTGGTTGCATGGGGGTCTA1480.10262740012897768No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATGCCAAGTAAGTCTACAAAGAA1450.10054711499122813No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)