FastQCFastQC Report
Tue 7 May 2024
EGAF00005808197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21805
Total Bases3.2 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA981044.98968126576473No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT6362.916762210502178No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG5152.3618436138500343No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG4722.164641137353818No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA4602.1096078880990596No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2631.2061453795001147No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT1820.8346709470304976No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA1810.8300848429259344No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT1670.76587938546205No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACACTGACTATGGCTTAAT1570.7200183444164182No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG1450.6649850951616602No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT1400.6420545746388443No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC1380.632882366429718No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG1240.5686769089658334No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC970.4448520981426278No Hit
CATAGACTCACTCTGTCACCCAAGCTTACGGTAGCAGAAGCTTTGAGATT970.4448520981426278No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT950.4356798899335015No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGGTCTCATAGAGGTTTCCT850.3898188488878697No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTACTATGGCTTAA840.3852327447833066No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA840.3852327447833066No Hit
CATAGAACCAACCCTGATTCTGCTGGAGACCCCATATCTACCAAAGATCT770.3531300160513644No Hit
CATAGACTCACTCTGTCACCCAAGCTGAGTGCAGTGCTATAATCATAGCT760.3485439119468012No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG740.33937170373767483No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT700.32102728731942215No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGAAACATTTTCTGGTCA690.316441183214859No Hit
CATAGATCCCTGGCAAGAATTCCTCATGGTGGGAGTATACTGATAGCTCT690.316441183214859No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA660.30268287090116947No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT650.2980967667966063No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGACTATGGCTTAATGTT650.2980967667966063No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG640.2935106626920431No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT640.2935106626920431No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG630.28892455858747995No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA570.26140793396010087No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAACCTGTGTATA540.24764962164641138No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG540.24764962164641138No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT530.24306351754184818No Hit
CATAGATCTCAAACAGCCTCTCCCAGTACGGTAGCAGAAGCTTTGAGATT500.2293052052281587No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTTACGGTAGCAGAAGCTTTGAGA480.22013299701903233No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA470.21554689291446916No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTTAGAGGCAAGGGTACTATTT460.21096078880990599No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA460.21096078880990599No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA460.21096078880990599No Hit
CATAGATGAAAGAGCATTGGTTGTAACACTACGGAGGCTGAAACTCTAAG440.20178858060077962No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTATAGAGGTTTCCTGGGCAT440.20178858060077962No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA440.20178858060077962No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA440.20178858060077962No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGTCTTCAGGTCA430.19720247649621644No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA410.18803026828709013No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA400.18344416418252693No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA400.18344416418252693No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG390.1788580600779638No Hit
CATAGAGGAAAGAACAACTGCGGACGCTTTGTTCTTTCGCTCTTCACAAT390.1788580600779638No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA390.1788580600779638No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT370.16968585186883742No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACACCAAAAGCACAAGGGA370.16968585186883742No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC360.16509974776427425No Hit
CATAGAACAATCAGGCACCCACCATGTACGGTAGCAGAAGCTTTGAGATT360.16509974776427425No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT350.16051364365971107No Hit
CATAGATGTTGTTGTTCTGTTGCCCATACGGTAGCAGAAGCTTTGAGATT340.1559275395551479No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA330.15134143545058473No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG330.15134143545058473No Hit
GATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA330.15134143545058473No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA320.14675533134602156No Hit
CATAGATGAAAGAGCATTGGTTGTAACACACACTGAAACATTTTCTGGTC320.14675533134602156No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA300.13758312313689522No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTACGGTAGCAGAAGCTTTGAGATT300.13758312313689522No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCTGACGACATGGTGCCATACCAA300.13758312313689522No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCATGTCGTCAGTGTGTGCCAT290.13299701903233202No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG280.12841091492776885No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC280.12841091492776885No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC270.12382481082320569No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCTGC270.12382481082320569No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA270.12382481082320569No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGTATGCAGTCTGT260.1192387067186425No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA260.1192387067186425No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC260.1192387067186425No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT260.1192387067186425No Hit
CATAGACACAACGTTTGAGACTGCCTTACGGTAGCAGAGGCAAGGGTACT260.1192387067186425No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT250.11465260261407935No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACATTTATCGGGAG250.11465260261407935No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACCTTCCTGTGTGGCCAACAGG250.11465260261407935No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG240.11006649850951616No Hit
CATAGGGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA240.11006649850951616No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA240.11006649850951616No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT230.10548039440495299No Hit
CATAGACACAACGTTTGAGACTGCCTTATAGAGGTTTCCTGGGCATCAAG220.10089429030038981No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA220.10089429030038981No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)