FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89284
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC68157.632946552573809No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA62176.963173692934904No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA55826.251960037632723No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC42184.7242507056135485No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT27613.0923793736839746No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA25392.843734599704314No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT22422.5110882128936876No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA20962.3475650732494064No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG18992.126920836880068No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT16261.8211549661753508No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA13411.5019488374176784No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC13371.4974687514000269No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA13201.478428385825008No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG12961.4515478697190987No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA12651.4168272030822993No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10371.1614623000761615No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA9891.107701267864343No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC8610.9643385152994937No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT8010.8971372250347207No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG7920.8870570314950046No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT7750.8680166659199857No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA7590.8500963218493794No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT7540.844496214327315No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC6360.7123336768065947No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6210.6955333542404014No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC5940.6652927736212536No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT5710.6395322790197572No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG5630.6305721069844541No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA5360.6003315263653063No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG5330.5969714618520676No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5150.5768110747726356No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC5120.5734510102593969No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG4920.5510505801711393No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG4920.5510505801711393No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4710.5275301285784687No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA4670.5230500425608172No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4650.5208099995519914No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGGGCAAGTGTATGGTCAG4630.5185699565431656No Hit
CATAGACCCCCATGCAACCACATCTATGGTGTACAGCCTACATCCCTCAT4390.4916894404372564No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG4320.48384928990636616No Hit
CATAGAATCCCTGCCCTTGACCTTGGCTACACCCGTAATCCCTCCCTTTT4250.476009139375476No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA3920.4390484297298508No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC3630.40656780610187715No Hit
CATAGATTTGGCACTCACATACACGCCTGTTTCAGGGATTCATGTAAATT3510.3931275480489225No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT3450.38640741902244524No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA3380.37856726849155503No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG3230.3617669459253618No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3190.35728685990771025No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT3140.35168675238564584No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3130.3505667308812329No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3110.34832668787240717No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT3100.3472066663679943No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA3030.3393665158371041No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT3010.3371264728282783No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2970.3326463868106268No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT2930.3281663007929752No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC2820.31584606424443346No Hit
CATAGATGGCATGTCACTTCCTCAGAACAAGGGCATGGTCAAGTGTCTAT2670.2990457416782402No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT2590.29008556964293714No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2560.28672550512969847No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG2560.28672550512969847No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGCACATTATTATTGGTTGGTTC2540.2844854621208727No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATAGTCACTCAAATATAGAC2440.2732852470767439No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA2360.2643250750414408No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2340.262085032032615No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA2330.26096501052820215No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT2320.2598449890237893No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC2260.25312485999731194No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCCTGTGATTGTCCTGGTCTATG2250.25200483849289906No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTCCTGGGCCCATAATACAC2200.24640473097083462No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT2170.243044666457596No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2080.23296447291788003No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG1990.22288427937816407No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCCCAGGGAACACGGTGGTGGTGG1930.21616415035168676No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC1850.20720397831638365No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT1710.1915236772546033No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1690.18928363424577752No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCCTGGTGG1650.184803548228126No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCTCATAGAGAAGGAAAATGTCAG1630.1825635052193002No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT1630.1825635052193002No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT1620.18144348371488733No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1620.18144348371488733No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG1570.17584337619282292No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCCCTTCATTTTGCTGGAACTCTA1570.17584337619282292No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1520.17024326867075848No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1520.17024326867075848No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA1510.16912324716634558No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATTGTCCTTGCACACCATGG1480.16576318265310694No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT1480.16576318265310694No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG1450.1624031181398683No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1430.1601630751310425No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC1420.15904305362662963No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1420.15904305362662963No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTGGGAGGAACAGGGAGATGTTCTA1380.15456296760897809No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGATCGTTTGAGCCTGGGAGG1360.15232292460015232No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGACCTTTTAGCTATTAAGATG1360.15232292460015232No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG1330.14896286008691367No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTACCG1260.1411227095560235No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTCTGCCAGCATGAGAAGAATG1150.12880247300748174No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA1150.12880247300748174No Hit
CATAGAATTGCCTACTTTGGGACCCAGTGCTCTCTTCCGCCTTTATCCTT1120.1254424084942431No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT1010.11312217194570137No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA970.10864208592804982No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTCCATCAGAGCATCACCC970.10864208592804982No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC940.10528202141481116No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA930.10416199991039829No Hit
CATAGACAGTCCTGCCGTGTACATGTCGTGTACAGCCTACATCCCTCATC910.10192195690157252No Hit
CATAGAATTGCCTACTTTGGGACCCACTATCCATCAGAGCATCACCCCTT900.10080193539715962No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)