FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences158341
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1677210.592329213532818No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG94435.963711230824613No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG75674.77892649408555No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC70864.475151729495203No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA56753.5840369834723793No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG56003.536670855937502No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA55473.503198792479522No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT43642.7560770741627247No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT37712.3815688924536285No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG33682.1270549004995547No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT30841.947695164234153No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA26661.6837079467731035No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA25571.6148691747557489No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC23881.5081375007104918No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA22011.3900379560568645No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC17311.0932102235049672No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG16291.0287922900575341No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT16271.0275291933232706No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG15961.007951193942188No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG15260.9637428082429693No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGACGCTATACCACACTAC13340.8424855217536834No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA12170.768594362799275No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC11690.7382800411769536No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC11420.7212282352643977No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA11110.7016502358833152No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA10680.6744936560966521No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT10620.670704365893862No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA9790.6182858514219312No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG9020.5696566271527905No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGCCCTCTCTGCTGTTCCT8890.5614464983800784No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG8620.5443946924675226No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG8600.5431315957332592No Hit
CATAGAAGGACAAAGACATTTAGGACCCTCTCTGCTTGCATGACAGAGCG8600.5431315957332592No Hit
CATAGATCACGTAGAAACTGGAGAGGCACACTGTCATTGTCGCTGTCCCA7530.47555592045016765No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGCTGAAGTGATGGGCTA7070.44650469556210964No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC6950.43892611515652924No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCTGTCATTGTCGCTGTCC6930.4376630184222659No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG6760.426926696181027No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT6560.41429572883839305No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA6330.3997701163943641No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT6190.39092843925452025No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGCCCTCTCTGCTGTTCC6150.3884022457859935No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG5740.36250876273359395No Hit
CATAGACGGATTATTCTCTCCATGGTCTCAAACTGCTGGGGTTGCTCTAT5720.36124566599933056No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT5720.36124566599933056No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGTCGTGCTGAAGTGATGGGCT4880.30819560316026806No Hit
CATAGACAGTGCCTTTGTGCGTGTTAACACTGACGCTATACCACACTACA4820.30440631295747783No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA4750.29998547438755596No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT4740.29935392602042427No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC4630.2924068939819756No Hit
CATAGACACAACAGAGAGAACGGGCTATGTTCTTCCTTTTCTGCCTTCAT4470.2823021201078685No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTGATAGGCTTAGAGGGCTTGCTC4380.2766181848036832No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA4260.2690396043981028No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT4240.2677765076638394No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGTCTGCCTCTAAGTAA3940.24883005664988853No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA3870.24440921807996666No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGGAGACAGCCGCTCACCTC3600.22735741216741082No Hit
CATAGATGGCCAAGATACGAGCACATTACGGTAGCAGCATAATTTCCCAT3550.22419967033175237No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT3550.22419967033175237No Hit
CATAGACGGATTATTCTCTCCATGGTCTGTTTCCCCACTCAAATACCATC3480.2197788317618305No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTTGCATGACAGAGCGAGACTT3450.21788418666043538No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGGCTCAGGTATGTCTT3400.2147264448247769No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGTGGAAGGGTAAGAGAG3330.21030560625485503No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT3320.2096740578877233No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC3160.19956928401361618No Hit
CATAGAAAAAACAGTTGGCCAGGCATACACTGCCCTCTCTGCTGTTCCTT3130.19767463891222106No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA3110.19641154217795773No Hit
CATAGACCTCCGACAGTTTTTATGCACACACTGACGATCATTGTTCACTG3090.1951484454436943No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG3040.19199070360803583No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG3020.19072760687377244No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGCCCTCTCTGCTGTTCCTT2990.18883296177237735No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGATCATTGTTCA2970.18756986503811393No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGATCATTGTTCACT2930.18504367156958715No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG2860.18062283299966528No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT2800.1768335427968751No Hit
CATAGAGTGCCTGTTTCCTCATTCGTTCTACACATAGAGTGTCTGTTTCC2730.17241270422695323No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA2710.17114960749268984No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC2640.16672876892276794No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCCCAACTGTCTC2610.16483412382137286No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGGCTAATCTGAAATCTT2530.1597817368843193No Hit
CATAGAAGGACAAAGACATTTAGGACCCTACGGTGGAAGGGTAAGAGAGG2510.15851864015005587No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGCTCAGGTATGTCTTTATTAGCT2490.15725554341579248No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCTCCCAAGTATTAGAGCA2480.15662399504866079No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTACGCTATACCACACTA2420.1528347048458706No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA2400.15157160811160722No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACATAGAACATTGCTTCTTGTG2370.14967696301021213No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA2350.14841386627594874No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTAGGTCTACCAGTTATTAG2320.14651922117455365No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA2270.14336147933889518No Hit
CATAGATCAAGGAAAACACCAGCCCAGGAAAGAATCACCCACAGCCAGGA2260.14272993097176348No Hit
CATAGACCAGCAGACACTCCCATCATCACTGACGCTATACCACACTACAC2240.14146683423750006No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC2190.1383090924018416No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT2160.13641444730044652No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATCTACAAAGGATTCTGGGCCA2150.1357828989333148No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT2120.1338882538319197No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGACATGGGTCTACCAG2080.13136206036339293No Hit
CATAGACTCATTGCACTTTCCACAACTGTCACTGTCCCAACTGTCTCTGA2010.12694122179347106No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2010.12694122179347106No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC1950.12315193159068087No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1950.12315193159068087No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGGGCCCCAGTGTGAATACTT1930.12188883485641747No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG1900.11999418975502239No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTGAGGAGCTGAGTCATGGG1880.118731093020759No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT1820.11494180281796881No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT1750.11052096424804694No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGAGGGTGGAAGGGTAAGAGAGGG1680.10610012567812506No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTACTGTGTGCTTGAACC1640.10357393220959826No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGACATGGTTCTACACA1620.10231083547533489No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)