FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808209

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808209
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences158341
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1659110.478018959081982No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG93035.875294459426176No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG72824.598935209453016No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG70194.43283798889738No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC55573.509514276150839No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG55143.482357696364176No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA54583.446990987804801No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT42902.709342494994979No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT36862.3278872812474343No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG32662.062636967052122No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG28791.8182277489721552No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA26351.664129947392021No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA25021.5801340145635052No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC23921.5106636941790188No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT22061.393195697892523No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT17821.1254191902286836No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC17151.08310544963086No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG15851.0010041619037393No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT15790.9972148717009491No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG15620.9864785494597104No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG14650.9252183578479357No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGGGGTCCTAAATGTCTTTG12790.8077503615614401No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA11830.7471217183167973No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG11350.7168073966944758No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC11280.712386558124554No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT10530.6650204305896767No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT10480.6618626887540182No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT10410.6574418501840963No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT9640.6088126259149557No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG8910.5627095951143418No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCAACATGCTTTTAGTCACG8590.5425000473661276No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC8480.5355530153276788No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG8410.531132176757757No Hit
CATAGAAGTCTCGCTCTGTCATGCAAGCAGAGAGGGTCCTAAATGTCTTT8300.5241851447193083No Hit
CATAGATGGGACAGCGACAATGACAGTGTGCCTCTCCAGTTTCTACGTGA7360.4648195982089288No Hit
CATAGATCTAGCCCATCACTTCAGCAACACTGACGAATGAGGAAACAGGC6920.4370314700551342No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT6850.43261063148521234No Hit
CATAGATGGGACAGCGACAATGACAGACACTGACGAATGAGGAAACAGGC6820.43071598638381714No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG6670.4212427608768417No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG6170.3896653425202569No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTCAGACCCAGGCTACACATCTAT6110.38587605231746674No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGTTAATATAGAAGAGACACA5920.37387663334196447No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGGGTCCTAAATGTCTTTGTCC5830.3681926980377792No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT5720.36124566599933056No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT5570.3517724404923551No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG5540.34987779539096No Hit
CATAGATCTAGCCCATCACTTCAGCACGACAGGGTCCTAAATGTCTTTGT4810.3037747645903462No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTAACACGCACAAAGGCA4740.29935392602042427No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC4550.287354507044922No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC4430.2797759266393417No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAACAACAACAAAACTCGTGACTTC4350.2747235397022881No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATAGCCCGTTCTCTCTGTTGTGT4320.27282889460089305No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA4200.26525031419531264No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG4170.26335566909391755No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTGTACAGTTGTGGAAAGTGC3890.24567231481423005No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA3750.23683063767438628No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGCCCGTTCTCTCTGTTGTGTC3530.22293657359748897No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCATGGAGAGAATAATCCGTC3470.21914728339469877No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTAATGTGCTCGTATCTTG3470.21914728339469877No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTATGAGCATGCCTTTGA3400.2147264448247769No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT3400.2147264448247769No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT3360.21220025135625012No Hit
CATAGAAGTCTCGCTCTGTCATGCAACTGTCATTGTGGGTTTTAACTACT3300.20841096115345992No Hit
CATAGACCCTCTCTTACCCTTCCACCACACTGTCATTGTGGGTTTTAACT3290.20777941278632825No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3190.20146392911501126No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC3140.19830618727935279No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGCCTGGCCAACTGTTTTTT3080.1945168970765626No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT3030.19135915524090413No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG2980.18820141340524565No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG2980.18820141340524565No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTGCATAAAAACTGTC2950.18630676830385054No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGCCATGCTGAAGTCCCATGAT2940.18567521993671884No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGGGTCATTGTGAGG2830.1787281878982702No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGTTACAAAAATTGGG2800.1768335427968751No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT2780.17557044606261168No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG2710.17114960749268984No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG2690.16988651075842642No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACGAAT2680.16925496239129473No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG2600.16420257545424116No Hit
CATAGAACACGAAGATTTCAGATTAGCCTACACTGTCATTGTGGGTTTTA2470.15599244668152912No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCCTGGCCAACTGTTTTTT2440.15409780158013403No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGACACTGTCATTGTGGGTTTT2430.15346625321300233No Hit
CATAGACCCTCTCTTACCCTTCCACCGTAGGGTCCTAAATGTCTTTGTCC2420.1528347048458706No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGGGACAGTTGTGGAAAG2400.15157160811160722No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAGACTGTTAATATAGAAGAGACA2370.14967696301021213No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC2340.14778231790881705No Hit
CATAGACCAGTTACCACAAGAAGCAATGTTCTATGTCTGAGAAAAGATGC2320.14651922117455365No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTACGGTAGCAGGCCCTT2270.14336147933889518No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC2210.13957218913610497No Hit
CATAGATGGCCCAGAATCCTTTGTAGATACCCTGGGAGAAGAAATGTTGG2160.13641444730044652No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT2080.13136206036339293No Hit
CATAGATTCTTTCCTGGCTGTGGGTGATTCTTTCCTGGGCTGGTGTTTTC2070.13073051199626123No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGATGATGGGAGTGTCTGCT2050.12946741526199784No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT2040.12883586689486615No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA2010.12694122179347106No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA1980.12504657669207597No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTGTA1940.12252038322354916No Hit
CATAGAAGTATTCACACTGGGGCCCATAGATGCCTGGCCAACTGTTTTTT1930.12188883485641747No Hit
CATAGACCCCATGACTCAGCTCCTCACCCATTGTAGATTTCTTTCACCTC1880.118731093020759No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG1880.118731093020759No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG1860.11746799628649561No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT1790.11304715771657371No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGACAGTTGTGGAAAGTGC1780.11241560934944202No Hit
CATAGACCCTCTCTTACCCTTCCACCCTCTCACTCTCCCACCATTCAGAC1680.10610012567812506No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT1640.10357393220959826No Hit
CATAGAATCTGGTTCAAGCACACAGTACACATAGATGCCTGGCCAACTGT1600.1010477387410715No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)