FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808212
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170676
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA164509.638144788956854No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG85334.999531275633363No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG69264.057981204152898No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC69114.049192622278469No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT53973.162131758419461No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA47102.759614708570625No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG46232.708640933698938No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA44662.6166537767465843No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA43042.521737092502754No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG40032.345379549555884No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC37462.1948018467740043No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA34802.0389509948674682No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT30651.7958002296749396No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC29791.7454123602615481No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA24041.4085167217417798No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG23251.362230190536455No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT18321.073378799596897No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT16720.9796339262696571No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG15340.8987789730249126No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT14970.8771004710679885No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT14630.85717968548595No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA13270.777496543157796No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA13010.7622630012421197No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA12590.7376549719937191No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT11290.6614872624153367No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC11090.6497691532494316No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA10220.598795378377745No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG9480.5554383744638965No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG9330.5466497925894678No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA8950.5243853851742483No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGATCATTGTTCACTGC8860.519112236049591No Hit
CATAGAAGGACAAAGACATTTAGGACCCCTGCAGTCTTTGGAGGAATCTA8300.4863015303850571No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC8290.48571562492676185No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG8030.47048208301108535No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT7780.4558344465537041No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT7740.4534908247205231No Hit
CATAGAAAGGTGCAATCAAGCCAGTTGCATGACAGAGCGAGACTTCTATG7330.42946870093041783No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG6650.3896271297663409No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA6550.3837680751833884No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT6410.3755653987672549No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG6360.3726358714757787No Hit
CATAGATGTGTAGCCTGGGTCTGACAAGGGGTAAGGCGTACTGGTCTATG6320.37029224964259766No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTACCAGTTATTAGTTGAATGAG6310.3697063441843024No Hit
CATAGATGTGTAGCCTGGGTCTGACACCGTACCTTCCCCACACCCTCTTC6240.3656050059762357No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGCTGAAGTGATGGGCTAGATC6120.35857414047669267No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA6110.35798823501839744No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGTGGAAGGGTAAGAGAGGGTC5910.34627012585249245No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTTTTGTCATGCCCTACTTCCT5900.34568422039419716No Hit
CATAGAAGGACAAAGACATTTAGGACCCAAGGCTAATCTGAAATCTTCGT5860.34334059856101623No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGGAGACAGCCGCTCACC5840.3421687876444257No Hit
CATAGATCCACGTGAGAATAAAGCATACAAGGGGTAAGGCGTACTGGTCT5570.326349340270454No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT5560.32576343481215875No Hit
CATAGATGGCCAAGATACGAGCACATACACTGCCCTCTCTGCTGTTCCTT5450.31931847477091096No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTAGAGATCCCACCATTTGCCA5310.3111157983547775No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT4830.28299233635660553No Hit
CATAGAGTCCAACTATTCCAGCACCAACACTGCCCTCTCTGCTGTTCCTT4750.2783050926902435No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT4700.2753755653987673No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGGCTCAGGTATGTCTTTA4660.27303194356558624No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTCCGCTATGTAGTTCAGG4620.27068832173240526No Hit
CATAGACACAACAGAGAGAACGGGCTGCTGTTCTTCCTTTTCTGCCTTCA4590.26893060535751956No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG4580.26834469989922427No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGCAGCATAATTTCCCAT4560.26717288898263375No Hit
CATAGACCAGCAGACACTCCCATCATTTGGCTCAGGTATGTCTTTATTAG4280.2507675361503668No Hit
CATAGACCAGCAGACACTCCCATCATACAAATGAGAAACCTGGATGCTTC4210.24666619794230005No Hit
CATAGACCCAAGACCCCAGCCTTTACTACGGTCTACCAGTTATTAGTTGA4170.24432257610911903No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG4130.24197895427593802No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCCGCTATGTAGTTCAGGT4050.23729171060957602No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCAAGGGGTAAGGCGTACT3840.22498769598537582No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC3750.21971454686071853No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTGCTGAAGTGATGGGCTA3630.21268368136117557No Hit
CATAGACCAGCAGACACTCCCATCATACGCTATACCACACTACACACTCT3610.21151187044458505No Hit
CATAGACACAACAGAGAGAACGGGCTCCGAGGTCAGGAAGGAACCTGCTC3600.2109259649862898No Hit
CATAGATGGCCAAGATACGAGCACATATGATGCTGAAGTGATGGGCTAGA3570.20916824861140407No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGCCCTCTCTGCTGTTCC3470.20330919402845155No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG3450.20213738311186105No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3420.20037966673697533No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAATGGTGGAAGGGTAAGAGA3250.19041927394595606No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCACTGACGACATGGTTCTAC3160.18514612482129883No Hit
CATAGAGTCCAACTATTCCAGCACCATGTCGTACAAATGAGAAACCTGGA3030.17752935386346058No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC3000.17577163748857483No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAACTTAGA2990.1751857320302796No Hit
CATAGACACAACAGAGAGAACGGGCTACGGTAGCAGCATAATTTCCCATG2970.17401392111368907No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTGCATGACAGAGCGAGACTTCTA2960.17342801565539384No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGCTGTCATTGTCGCTGTCCC2950.17284211019709858No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTACACTGCCCTCTCTGCTGTTCC2900.16991258290562236No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT2880.16874077198903184No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGACATGGTCTACC2810.1646394337809651No Hit
CATAGACCCAAGACCCCAGCCTTTACCGTACGCTATACCACACTACACAC2770.1622958119477841No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT2700.15819447373971735No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGCTATACCACACTACA2670.1564367573648316No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGGGTCTACCAGTTATTAGTTG2580.15116360824017436No Hit
CATAGACACAACAGAGAGAACGGGCTGGTGCATTACAGAGAGGAGATCTA2560.14999179732358386No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCGCAGTGTCTGAGGAGAATTCA2550.1494058918652886No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG2540.14881998640699337No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2540.14881998640699337No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2540.14881998640699337No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACACTGACGCTATACCACACT2510.14706227003210762No Hit
CATAGAGAAGACTCCCTCAACCCACCACGCTGTCCTTCTCTGAATCTATG2500.14647636457381238No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG2440.14296093182404088No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTTCTACACATAGAAATGATGCTG2430.14237502636574562No Hit
CATAGACCTCCGACAGTTTTTATGCACACACTGACGCTATACCACACTAC2410.14120321544915512No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2330.13651597178279312No Hit
CATAGATCCACGTGAGAATAAAGCATACATCCACGCTGTCCTTCTCTGAA2330.13651597178279312No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCCGCTATGTAGTTCAGGT2290.13417234994961214No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTACGATCATTGTTCACT2260.13241463357472638No Hit
CATAGAAAAAACAGTTGGCCAGGCATACACTGACGACATGGCTCAGGTAT2200.1288992008249549No Hit
CATAGAGAAGACTCCCTCAACCCACCAGGCTAATCTGAAATCTTCGTGTT2150.12596967353347863No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACACTGGCTCAGGTATGTCTT2060.12069652440882139No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACAACTGTGTGCTTGAACCAGA2010.11776699711734515No Hit
CATAGACGGATTATTCTCTCCATGGTCTGTTTCCCCACTCAAATACCATC2010.11776699711734515No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTAGGTGGAAGGGTAAGA1970.11542337528416415No Hit
CATAGAGAAGACTCCCTCAACCCACCGTACATTGCTTCTTGTGGTAACTG1880.1101502261595069No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGTGTGCTTGAACCAGAT1860.1089784152429164No Hit
CATAGACCAGCAGACACTCCCATCATCATTTATTTTAAAGGACTGGAAGC1860.1089784152429164No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACCCACAGCCAGGAAAGAATC1850.10839250978462114No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGGCTCAGGTATGTCTTTAT1820.1066347934097354No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1820.1066347934097354No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG1780.10429117157655442No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACACTGACGACATGGGTCTAC1760.10311936065996391No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTACGCTATACCACACTA1750.10253345520166866No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGACGCTATACCACACTACA1730.10136164428507816No Hit
CATAGATGTGTAGCCTGGGTCTGTCATTGTCGCTGTCCCATCTATGAGAC1720.10077573882678291No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)