FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29194
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1443949.458792902651226No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA8783.0074672877988626No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA7802.6717818729876No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG7362.5210659724600943No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC5171.7709118311981915No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG5091.7435089401931905No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA4301.4729053915188053No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC3461.1851750359662945No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC2720.9316982941700349No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG2530.8666164280331574No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG2410.825512091525656No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG2330.7981092005206549No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA1580.5412070973487704No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG1550.5309310132218948No Hit
CATAGATGTGCCTCTCCAACATTCATACACTGACGACATGGTTCTACACA1330.4555730629581421No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1010.34596149893813793No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC970.33226005343563747No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT850.2911557169281359No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG850.2911557169281359No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG840.2877303555525108No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA830.28430499417688565No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT790.2706035486743852No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGACCAAGGGATTATCAGTAG770.26375282592313487No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGACATGGTTCTACACA750.2569021031718846No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG740.2534767417962595No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC690.23634993491813386No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG670.2294992121668836No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACTTGCG660.22607385079125847No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA640.21922312804000824No Hit
CATAGATGTGCCTCTCCAACATTCATGTGTAGAACTGTCAGAGATAGCAC640.21922312804000824No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG630.2157977666643831No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA620.21237240528875798No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG620.21237240528875798No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAACACTGACGACATGGTTCTA610.20894704391313285No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG580.19867095978625746No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA580.19867095978625746No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG580.19867095978625746No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT570.19524559841063233No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGACATGGTTCCACACT560.1918202370350072No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA560.1918202370350072No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACTTCTTATAGC510.17469343015688157No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG500.17126806878125642No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG480.16441734603000616No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG470.16099198465438103No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGGAAAGCAATCACCGCCAG470.16099198465438103No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG470.16099198465438103No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA440.15071590052750566No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT440.15071590052750566No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG430.14729053915188053No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA420.1438651777762554No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG420.1438651777762554No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATACGGGGGCAGATTAACAGGTCA410.14043981640063027No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA400.13701445502500514No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT400.13701445502500514No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT390.13358909364938No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCCGAGA370.12673837089812975No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT360.12331300952250462No Hit
CATAGAAGATGGTCTGCTACACTGGTGGTTCCACACTCATGCAAAGCTGG350.1198876481468795No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTAGCATGTTGAGATGAATAA330.11303692539562923No Hit
CATAGATCATGGGACTTCGGCATGGCGGTGTTTGCAGATTTGGACCTGCG330.11303692539562923No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGGACCAAGTCTTCTT320.10961156402000412No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG310.10618620264437899No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA300.10276084126875386No Hit
CATAGATCATGGGACCTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG300.10276084126875386No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)