FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155445
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1792511.53140982341021No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG92225.932644986972884No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC81645.252018398790569No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG80245.161954389012191No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA56373.6263630222908425No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG49783.202418861976905No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG39392.5340152465502266No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA33442.1512432049921193No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA31492.0257969056579497No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT24471.5741902280549391No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT23441.5079288494322751No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA23251.495705876676638No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG21841.4049985525427No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT21441.3792659783203063No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC17621.1335198944964457No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC15881.0215831966290327No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT15390.9900607932066005No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA15110.9720479912509248No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT13900.8942069542281836No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC13150.8459583775611953No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC13140.8453150632056354No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC11940.7681173405384542No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACGCTATACCACACTACACACT11350.7301617935604233No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG10830.6967094470713114No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA10310.6632571005821996No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG10260.6600405288044003No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGAGGAGCTGAGTCATGGGGTCT10210.656823957026601No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT9210.5924925214706166No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA9110.5860593779150182No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGACATGCCAGGAATCAATGTT9060.582842806137219No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGACGCTATACCACACTACA8930.574479719514941No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG8590.5526070314259063No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA8400.5403840586702693No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG8360.5378108012480298No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGGAGACAGCCGCTCACCTC8050.5178680562256747No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGATCATTGTTCACTGC7460.47991250924764384No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG7390.4754093087587249No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATAGAGATCCCACCATTTGCCA7380.4747659944031651No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA7200.4631863360030879No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGCTAATCTGAAATCTTCGTGT6840.4400270192029336No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA6790.4368104474251343No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA6500.4181543311138988No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT5880.37826884106918846No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGCCCTCTCTGCTGTTCC5840.37569558364694905No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC5770.37119238315803016No Hit
CATAGACGGATTATTCTCTCCATGGTCTGGAAGTAGGACATGCCAGGAAT5430.34931969506899546No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGGGTTACCACCTTGCAAGA5370.3454598089356364No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT5310.3415999228022773No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT5290.3403132940911577No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC5150.3313068931133198No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGCTCCCAAGTATTAGAGC4910.3158673485798835No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA4880.31393740551320404No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGACATGGTTCTACACAT4690.301714432757567No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA4510.29013477435748974No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA4410.2837016308018913No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCAGTGTTGCATGACAGAG4270.27469522982405353No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC4110.264402200135096No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT4100.26375888577953616No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC4080.2624722570684165No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA3880.2496059699572196No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT3870.24896265560165973No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3830.24638939817942038No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG3770.2425295120460613No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGACGATCATTGTTCACTG3730.23995625462382192No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT3700.2380263115571424No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA3680.2367396828460227No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGACAAGGGGTAAGGCGTACT3650.2348097397793432No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG3620.23287979671266362No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACACTGACGCTATACCACACT3510.22580333880150538No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGCAAGGGGTAAGGCGTACTG3160.20328733635691082No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA3120.20071407893467144No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTTTTTGTGCACCTTCATTGTTGC2950.18977773489015407No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTGTGCACCTTCATTGTTGCTCTA2930.1884911061790344No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2680.17240824729003829No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC2670.17176493293447845No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG2670.17176493293447845No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2640.1698349898677989No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGGAGGTGAAAGAAATCTACAAAG2620.16854836115667923No Hit
CATAGATGTGTAGCCTGGGTCTGTCATTGTCGCTGTCCCATCTATGAGAC2620.16854836115667923No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA2580.16597510373443983No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2570.16533178937888No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACATGCCAGGAATCAATGT2500.16082858888996107No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGACATGGTTCTACACA2500.16082858888996107No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGCTCAGGTATGTCTTTATTAGCT2450.15761201711216186No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT2290.14731898742320435No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTACACTGGCTCAGGTATGTCTTT2260.1453890443565248No Hit
CATAGAAATGATGCTGAAGGGCCTGCAATGATGCTGAAGTGATGGGCTAG2250.14474573000096497No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTTTTTGTGCACCTTCATTGTT2200.14152915822316575No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2190.14088584386760591No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC2190.14088584386760591No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACTGTCATTGTCGCTGTCCC2150.13831258644536654No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2120.136382643378687No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG2110.13573932902312713No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCACTGACGCTATACCAC2100.13509601466756732No Hit
CATAGAAAAAACAGTTGGCCAGGCATGTCTTTATTAGCTCTATGGCTCAG2070.13316607160088778No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAGTCCCAACTGTCTCT2050.13187944288976808No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2040.13123612853420824No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC2010.1293061854675287No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT1890.12158641320081057No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1890.12158641320081057No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAAGCCAAACAATATAAAAGTCC1830.11772652706745151No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG1780.1145099552896523No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATGAGACCAAGTCT1780.1145099552896523No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGCCCTCTCTGCTGTTCCTT1740.11193669786741291No Hit
CATAGATGTGTAGCCTGGGTCTGACATTGTCGCTGTCCCATCTATGAGAC1740.11193669786741291No Hit
CATAGACCCAAGACCCCAGCCTTTACACTGACGACATGGTTCTACACATA1730.11129338351185307No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACACATAGACCAACATTTCT1640.10550355431181446No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCACTGTCCCAACTGTCTCT1630.10486023995625463No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG1590.10228698253401523No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1590.10228698253401523No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAA1590.10228698253401523No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)