FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123252
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2474420.075941972544058No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC72805.906597864537695No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC56154.555707006782852No Hit
CATAGAGATGTTTGATAAGCAGGGTGATCTATCCAGGAATTTTATTTTAA40933.320838607081426No Hit
CATAGATGAAAGCCTGTTGAATTTATGATCTATCCAGGAATTTTATTTTA36752.981696037386817No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC32552.640930775971181No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA30532.4770389121474703No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG25382.0591957939830587No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA23981.9456073735111803No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT23741.9261350728588582No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA22891.8571706747152177No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT22641.836887028202382No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA20141.6340505630740272No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA16821.3646837373835718No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA15481.2559633920747735No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA14531.1788855353259988No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG13291.0782786486223348No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA11500.9330477395904326No Hit
CATAGATGAAAGCCTGTTGAATTTATGACTGATACAGGAAGGCCTTTCTA11440.928179664427352No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA10160.8243273942816343No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT9440.7659104923246681No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT7970.6466426508291955No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA7280.5906597864537695No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA7100.5760555609645279No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG5390.4373154188167332No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT5390.4373154188167332No Hit
CATAGACCTTTGGGTTCATATCATCTGGCACTGACTGATACAGGAAGGCC5020.40729562197773667No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC4760.3862006296043878No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT4700.38133255444130726No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA4510.36591698309155224No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT4500.36510563723103884No Hit
CATAGAGCTGGCTTCCTAACTTCCAATACGGTTGCACAGATCATTTAAGC3930.31885892318177395No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACTGATACAGGAAGGCCTTT3620.29370720150585794No Hit
CATAGAAACCCCAAAGGCTATGTTCAATGGGCAAGCAATGACAGTCTATG3450.2799143218771298No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT3380.27423490085353586No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG3330.27017817155096874No Hit
CATAGAGCAACAGGGACTCTCATTCAATGGGCAAGCAATGACAGTCTATG3250.26368740466686136No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT3020.2450264498750527No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2890.2344789536883783No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA2740.222308765780677No Hit
CATAGATCATGGGACTTCAGCATGGCCTCATAGATGGAGACAGCCGCTCA2540.20608184857040857No Hit
CATAGACCAATAAAAGTTGATGGGATGAACACTGACGACCTGATTGGCCA2530.20527050270989516No Hit
CATAGATGCCCTTTTTGTGTACTTCCAAATCCTTTCCCTCACTCTCTCCA2320.18823223963911334No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA2290.1857982020575731No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA2270.18417551033654628No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA2170.17606205173141207No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCTGTCTCTA2080.16875993898679129No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT2070.16794859312627788No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAGTGAAACCCCATCTCTA2070.16794859312627788No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGACAGCCGCTCACCTCTATGAG2060.16713724726576445No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG2040.1655145555447376No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG1990.16145782624217053No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGGAGACAGCCGCTCACCTC1970.15983513452114367No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA1920.15577840521857655No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT1900.15415571349754975No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1870.1517216759160095No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGAGACAGCCG1860.15091033005549606No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG1770.14360821731087528No Hit
CATAGATCATGGGACTTCAGCATGGCTATTCACAAGCAATGGGGAAAGGA1750.14198552558984845No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1730.1403628338688216No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1710.13874014214779476No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1640.1330607211242008No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCATCTCTA1570.1273813001006069No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA1540.12494726251906663No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1540.12494726251906663No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA1530.12413591665855321No Hit
CATAGACACCATGCCTGGCTAATTTTTGTGTTTTTAGTGGAGACAGCCGC1490.12089053321649953No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA1460.11845649563495927No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA1400.11358842047187875No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA1400.11358842047187875No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT1330.10790899944828482No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACCCCATCTCTA1300.10547496186674456No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA1290.10466361600623114No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA1280.10385227014571771No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA1270.10304092428520428No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTCTCTACTAAAAATA1270.10304092428520428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)