FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115039
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG93088.091169081789653No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT67935.9049539721311906No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG67775.891045645389824No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT62955.472057302306174No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT36873.2050000434635213No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT30852.6816992498196264No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG27612.4000556333069656No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT27302.373108250245569No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT27072.3531150305548554No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG25602.225332278618555No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG22071.9184798198871686No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT20001.7385408426707465No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT19821.7228939750867096No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG17411.5133998035448848No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT17081.4847138796408175No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG16701.4516816036300733No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT16141.4030024600352924No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG15361.3351993671711333No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG15161.3178139587444258No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT14661.274350437677657No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT13771.196985370178809No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG11781.0240005563330696No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT9530.8284147115326107No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT8970.7797355679378298No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG8870.7710428637244761No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT8850.7693043228818053No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG8420.7319256947643843No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT7030.6110971061987673No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT7030.6110971061987673No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC6920.6015351315640783No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT6740.5858882639800416No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT6330.5502481767052912No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT5910.5137388190092056No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG5670.49287632889715666No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT5570.4841836246838029No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG5380.4676674866784308No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA5150.4476742669877172No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT4950.43028885856100973No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT4810.4181190726623145No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC4790.41638053181964374No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4630.4024722050782778No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT4310.37465555159554587No Hit
CATAGACAATTTCAGTGCGGCCGATGCCAAGTAAGTCTACAAAGAACCTC4120.35813941359017376No Hit
CATAGATCTACTCCTACAATCTTGGCAAAGCAGCAAACAATTTCAGAAAG3870.33640765305678944No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTAGGATGAGATAATTGCC3870.33640765305678944No Hit
CATAGACCAGGACAATCACAGGGCACTACGGTTGCAGGATGAATGGGGAC3640.31641443336607583No Hit
CATAGAACCTCAAGCCGGAAAACCTTACGGTTGCAGGATGAATGGGGACA3450.2998982953607038No Hit
CATAGAACTGACCATACACTTGCCCTCTGCTTTTACAAACTCAAGTGATT3450.2998982953607038No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG3290.2859899686193378No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACATAGATGTGGTTGCATGGGGG3290.2859899686193378No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT3190.27729726440598407No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3110.27034310103530107No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC3080.26773528977129496No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA3060.26599674892862424No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC3050.2651274785072888No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3010.26165039682194735No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT2900.25208842218725824No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC2890.25121915176592285No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT2860.24861134050191674No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC2740.23818009544589228No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC2690.2338337433392154No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2670.23209520249654467No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAAGCAGCAAACAATTTCAGAAAGT2550.22166395744052017No Hit
CATAGAAGGGGTGATGCTCTGATGGACACTTGAAAGCTCCCTGGATCTAT2540.2207946870191848No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT2520.21905614617651406No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT2460.2138405236485018No Hit
CATAGAACTGACCATACACTTGCCCTGCTCACGATGGTATTACATGGTCT2440.21210198280583106No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC2320.20167073774980657No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2280.1981936560644651No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC2230.1938473039577882No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTTTTACAAACTCAAGTGATT2230.1938473039577882No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGCGGTAGGTGGCTTCTGGTG2200.19123949269378213No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT2140.18602387016576988No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA2060.17906970679508688No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCTGCTTTTACAAACTCAAGT2050.17820043637375152No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT2040.17733116595241613No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2020.17559262510974538No Hit
CATAGACCAGGACAATCACAGGGCACACAGGAGTTGACAAACGACAGCTT2010.17472335468841002No Hit
CATAGAGGCCATTCTTCTCATGCTGGCATTCTTTCTCCAGACCTTCATCT1860.16168429836837941No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT1830.1590764871043733No Hit
CATAGATCCATGGTGTGCAAGGACAATGCACAGGACATTGGGGAATTCTA1820.15820721668303792No Hit
CATAGAACATCTCCCTGTTCCTCCCAGAACTTTCCCACCGCCCTTTTCTA1740.15125305331235495No Hit
CATAGAGTTCCAGCAAAATGAAGGGGACAGCATTCTTTCTCCAGACCTTC1660.14429888994167195No Hit
CATAGATCTACTCCTACAATCTTGGCAAAGGTAGGTGGCTTCTGGTGCAT1530.13299837446431212No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT1520.13212910404297673No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGAACTTTCCCACCGCCCTTTTC1490.12952129277897062No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1450.12604421109362912No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA1430.12430567025095837No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG1390.12082858856561687No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA1350.11735150688027539No Hit
CATAGACACTTGACCATGCCCTTGTTCGGTTGCAGGATGAATGGGGACAT1330.11561296603760465No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC1320.11474369561626926No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC1320.11474369561626926No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC1310.11387442519493389No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT1310.11387442519493389No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAGACTTGGTCTCATAGAACTTT1310.11387442519493389No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCCCAGTTAGGCTACTTGGGGGT1300.11300515477359853No Hit
CATAGAACTAGTTCCAGCACCACCAGGACATGGGTAGAATCTTGAACTCA1300.11300515477359853No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTTGCAGGATGAATGGGGAC1260.10952807308825703No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT1250.10865880266692166No Hit
CATAGACTCAGAACTGGCTCTAATTCCTACGGTAGGTGGCTTCTGGTGCA1250.10865880266692166No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGTGCACAGTTTGGAATGACTCTA1220.10605099140291553No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAATAGATTCTGTGTCTCTC1220.10605099140291553No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1210.10518172098158017No Hit
CATAGAAGGAGCTGGGAGTTGAGATAATGCCAAGTAAGTCTACAAAGAAC1200.10431245056024478No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGGTGGCTTCTGGTG1190.10344318013890941No Hit
CATAGACCAGGACAATCACAGGGCACTACGGTAGCAGCTCCTCTTCTCTT1180.10257390971757405No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGACTGGGTCCCAAAGTAGGCAAT1170.10170463929623867No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACGGTTGCAGGATGAATGGGGAC1170.10170463929623867No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)