FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102380
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG81948.003516311779645No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA41474.050595819495995No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA33543.27603047470209No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG30592.9878882594256693No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA28642.7974213713615943No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG27902.725141629224458No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG24292.372533697987888No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT20782.029693299472553No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA16881.6487595233444032No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT15551.5188513381519828No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC15041.4690369212736862No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA15041.4690369212736862No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT13491.3176401640945496No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA13481.3166634108224262No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA11131.0871263918734129No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA11011.0754053526079312No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG10080.9845672983004493No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC9910.9679624926743504No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC9350.9132643094354366No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA9340.9122875561633131No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT8780.8575893729243993No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC8700.8497753467474115No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT8420.8224262551279548No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG7750.7569837858956828No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT7560.7384254737253371No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG7090.6925180699355343No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA6920.6759132643094354No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT5930.5792146903692127No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC5610.547958585661262No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA5090.497167415510842No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA5010.48935338933385425No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA4960.4844696229732369No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACTGCCTCTTGTAGAAGGG4730.4620042977143974No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT4580.4473529986325454No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA4520.4414924789998047No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG4370.4268411799179527No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA4200.4102363742918539No Hit
CATAGATGTGCCACATACCTTTCCCAGGGTGGGGAAAGAGAGCACTCTAT3990.38972455557726116No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT3960.3867942957608908No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTAGATGCTCAGATCTCAAAAGGCT3880.37898026958390313No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCAGG3830.3740965032232858No Hit
CATAGATGCTTCTGATATGTTGCCGTACACATAGATGCTCAGATCTCAAA3700.3613987106856808No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC3590.3506544246923227No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGTT3530.3447939050595819No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGTTCTACACA3210.31353780035163115No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACGGACTACAAGTACCCACC3160.3086540339910139No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT3140.30670052744676696No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTAAAGCTCACTCTCAGTTGT3130.30572377417464347No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACATAGAACAGCTAAAA3110.30377026763039655No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC3010.29400273490916196No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACCTCTAACTTCATAGCAC2940.2871654620042977No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTCTACACATAGAACAGC2940.2871654620042977No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT2920.2852119554600508No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGCCTCTTGTAGAAGGGATG2910.28423520218792736No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT2900.2832584489158039No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAACTCTCAGTTGTGTGTGTGGTC2770.27056065637819887No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGACATGTGTGAGAGGGAAGG2750.26860714983395195No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGTGTGAGA2740.26763039656182847No Hit
CATAGAAGTGACCCTCAGCTCAGTGACGGAGATAGAGAGGTTGGTTCTAT2730.26665364328970503No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2730.26665364328970503No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA2720.26567689001758155No Hit
CATAGATGCTTCTGATATGTTGCCGTGATGCTCAGATCTCAAAAGGCTTC2710.2647001367454581No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG2680.2617698769290877No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2650.25883961711271736No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC2640.25786286384059387No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT2600.25395585075210003No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2550.2490720843914827No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTAACCACATAGACCAAAGCTAG2540.24809533111935922No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACATAGAACAGCTAA2530.24711857784723582No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAGGACACTTTGGACTCTG2500.2441883180308654No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA2470.241258058214495No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC2450.2393045516702481No Hit
CATAGAGAACAGCCCTGAGAGAATGCTATTGTTGCAGATTTCTATGGCCT2440.23832779839812462No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2400.2344207853096308No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACACTTTGGACTCTGCCTCTATG2360.23051377222113695No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG2330.22758351240476657No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT2300.22465325258839616No Hit
CATAGATGATCCATCTACCTCTGCTTCACACTGACGACATGGTTCTACAC2290.2236764993162727No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2240.2187927329556554No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA2230.21781597968353195No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGGTT2160.2109787067786677No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2110.2060949404180504No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG2080.20316468060168No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA2070.20218792732955657No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2070.20218792732955657No Hit
CATAGAACATCTACAGAACTCTCTACCCATAGAACAGCTAAAAATCTTGG2060.2012111740574331No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2050.20023442078530965No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGCCTGTTC1990.19437390115256886No Hit
CATAGAATACAACACACTCTCTGCCCTGCACACTCTCAGTTGTGTGTGTG1980.1933971478804454No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACTACAAGTACCCACCACCTCTA1960.19144364133619846No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA1940.18949013479195156No Hit
CATAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCTAC1910.18655987497558116No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTACGACATGGTTCTACACAT1890.18460636843133427No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1850.1806993553428404No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTAGGTCATTCTTCTCTGGGGGCT1850.1806993553428404No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA1840.17972260207071694No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT1820.17776909552647002No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGACATGTGTGAGAGGGAAGGAC1810.17679234225434656No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTGGCTGAGAAAGGAGGA1780.17386208243797616No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTTAATTAGGGAGATCTATAGAACA1720.1680015628052354No Hit
CATAGACTCTGTTTTGCTACCTGGGGATAGAACAGCTAAAAATCTTGGAG1700.16604805626098845No Hit
CATAGACCACCGTGCCCAGATAAGTTCACGCACAACTGGCATCTGGTGAT1700.16604805626098845No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATAGTTGCCT1670.16311779644461807No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACACATGAGAACATTAGC1640.1601875366282477No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA1640.1601875366282477No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC1640.1601875366282477No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1610.15725727681187732No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT1600.15628052353975386No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT1580.15432701699550694No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTGGGCACATGTGTGAGAGGG1580.15432701699550694No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA1570.15335026372338348No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGAATGGTTCTACACAT1560.15237351045126002No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC1550.15139675717913656No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG1540.15042000390701307No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1480.14455948427427232No Hit
CATAGATGCTTCTGATATGTTGCCGTACCATAGATGCTCAGATCTCAAAA1480.14455948427427232No Hit
CATAGAACATTAGCTTAGTTAATTAGGGAGATCTATGAGACCAAGTCTCT1430.13967571791365502No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1420.13869896464153156No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1420.13869896464153156No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT1390.13576870482516118No Hit
CATAGAAGGAGCTGGACTGGATGGACCTCATAGATCTCCCTCATTATCCC1340.13088493846454385No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1300.12697792537605002No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAAACTCCCATCTATGAGACCAAA1290.12600117210392656No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG1290.12600117210392656No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGAGAGGAGGGGGCAGAATATCT1210.11818714592693885No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCAAGTCCAGTGAACTCAAGGG1210.11818714592693885No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACGGCTGAGAAAG1190.11623363938269193No Hit
CATAGATGCTTCTGATATGTTGCCGTATGCTTCTGATATGTTGCCTTTCC1160.11330337956632155No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGTGT1150.11232662629419808No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGTGTGAGA1150.11232662629419808No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1130.11037311974995118No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC1110.10841961320570423No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA1100.10744285993358078No Hit
CATAGAGAACAGCCCTGAGAGAATGCATGGTTCTACACATAGAGAACAGC1040.10158234030084No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCATAGATCTCCCTCATTA1030.10060558702871655No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1030.10060558702871655No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACTGACGACATGGTTCTACACA1030.10060558702871655No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)