FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96479
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3539936.69088609956571No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG42024.355351941873361No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC34513.576944205474766No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA33583.480550171539921No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT19131.982814913089895No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA14881.5423045429575348No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG12611.307020180557427No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA12351.280071310855212No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT10951.13496201245867No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT9671.0022906539246883No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGACAGGATGCGCAGATGGTCT9010.933881984680604No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT8450.875838265321987No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT7900.8188310409519169No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT7570.7846267063298749No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT5950.6167145181853045No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT5720.5928751334487298No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCATGTGTGTGCG5410.5607437888037812No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC5300.5493423439297671No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC5190.537940899055753No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG5160.5348314140901129No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATGATTGTAAGTTT5150.5337949191015662No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA5130.5317219291244727No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT4810.4985540894909773No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT4760.49337161454824363No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA4540.4705687248002156No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC4450.46124026990329503No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTCTGGAGGATGATCAAT3890.4031965505446781No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA3740.3876491257164772No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT3240.33582437628914064No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3140.32545942640367337No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT2980.30887550658692564No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2950.30576602162128547No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2910.30162004166709855No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT2720.28192663688471065No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2710.2808901418961639No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT2710.2808901418961639No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2710.2808901418961639No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTAAGGTCAAGGTGGGA2690.27881715191907047No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT2610.27052519201069664No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT2610.27052519201069664No Hit
CATAGAACCAAAAATGGCTAGGCATGTTTATCACCTTCTATGAGACCAAG2590.2684522020336032No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2500.25912374713668257No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT2220.23010188745737412No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG2160.22388291752609377No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTACACTGACGACATGGTATA2160.22388291752609377No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTCTACA1930.20004353278951897No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTAGTTCCATGTGTGTG1900.19693404782387874No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1890.19589755283533203No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1840.1907150778925984No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1820.18864208791550494No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1740.1803501280071311No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACAGTGCCATCACAGTTCATTGTA1730.17931363301858436No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATTCCAGT1640.16998517812166378No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1640.16998517812166378No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCTCTCTGTCTCCTGTCACCATG1630.16894868313311706No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1570.16272971320183668No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1570.16272971320183668No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1500.15547424828200956No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCGCTTCTGTAATCTCAGC1420.1471822883736357No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC1410.14614579338508898No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTTACTCCTGTAATTCCAGC1380.1430363084194488No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTTGAAGA1360.14096331844235532No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1300.13474434851107495No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1290.13370785352252823No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1290.13370785352252823No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1260.13059836855688803No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1250.12956187356834128No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC1240.12852537857979457No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATACCAGC1220.1264523886027011No Hit
CATAGACACATGTAGGATGGGGTGGCTTATGCCTATAATCCTAGCACTTT1200.12437939862560764No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACTTGTAATCCTAGC1130.11712393370578054No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1120.11608743871723379No Hit
CATAGAAAATAATGTGGCCGGGCATGGTACCTCACGCCTATAATCCCAGT1060.10986846878595342No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC1050.1088319737974067No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCAAGC1040.10779547880885997No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACGCCTATAATTCCAGC1040.10779547880885997No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA990.1026130038661263No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGAACCTGCG990.1026130038661263No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)