FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145493
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2087614.348456626779296No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA58254.003629040572399No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG46143.1712865911074757No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA43562.9939584722289045No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA41572.8571821324737274No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT37112.550638175032476No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG22391.5389056518183004No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT20761.426872770511296No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT16691.1471342263888984No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA16351.1237654045211798No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA16001.099709264363234No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG15991.0990219460730069No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC15431.0605321218202937No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC14931.0261662073089426No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA14781.0158564329555375No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG13800.9484992405132894No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC12900.8866405943928574No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT12150.8350917226258309No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC11850.81447217391902No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT10210.7017519743217886No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA9920.6818197439052051No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA9530.6550143305863512No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9480.6515777391352161No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT9090.6247723258163622No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACTCTCAGTTGTGTGTGTGGTCT8830.6069020502704597No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA8810.6055274136900056No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT8650.5945303210463734No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT7920.5443560858598008No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA7770.5340463115063955No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGAGACCA7220.4962438055439093No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT7040.483872076319823No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6990.4804354848686878No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG6930.4763115751273257No Hit
CATAGAATACAACACACTCTCTGCCCTGTAGAACAGCTAAAAATCTTGGA6920.47562425683709864No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA6640.45637934471074204No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTAATGGAGGAGTATGGG6340.4357597960039315No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCACATAGAACAGCTAAAA6230.42819929481143426No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA6130.421326111909164No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG5880.4041431546534885No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG5660.389022152268494No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA5650.388334833978267No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCTATGAGACCAAG5500.37802505962486166No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA5420.3725265133030455No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG5410.3718391950128185No Hit
CATAGATGCTTCTGATATGTTGCCGTACCATAGATGCTCAGATCTCAAAA5260.3615294206594132No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTTCTACACATAGACATGTGTGAG5220.35878014749850506No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA5180.356030874337597No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG5170.35534355604737No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA5090.3498450097255538No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC4970.34159719024282953No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA4950.3402225536623755No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGACATGTGTGAGAGGGAAGGAC4740.32578886956760805No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAACAGCTAAAAATCTT4560.3134171403435217No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG4510.3099805488923866No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4340.2982961379585272No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCCTG4320.29692150137807316No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA4160.2859244087344408No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGTGTGAGA4160.2859244087344408No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC4050.2783639075419436No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACACTTTGGACTCTGCCTCTATG4020.2763019526712625No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC3910.2687414514787653No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCCTGTTCACTCTGATGGTA3870.2659921783178572No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTACTCTCAGTTGTGTGT3860.2653048600276302No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA3750.25774435883513297No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC3620.24880922106218167No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGAATGTACAGGTGCAAATTGTCA3600.24743458448172762No Hit
CATAGACCTGTGTGTGAGGCATTGTTAGGGTAATGGAGGAGTATGGGATC3540.2433106747403655No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC3530.24262335645013847No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGGGTCATTCTTCTCTGGGGGCT3470.23849944670877635No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3410.23437553696741423No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG3400.2336882186771872No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTACACATAGAACATTAGCTT3400.2336882186771872No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG3380.2323135820967332No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCAGATCCTTGTCAACTCTTGGTC3350.2302516272260521No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA3310.22750235406514405No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC3270.22475308090423593No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC3170.21787989800196575No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG3160.21719257971173872No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA3130.21513062484105763No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT3120.2144433065508306No Hit
CATAGACTCTGTTTTGCTACCTGGGGCCACGCACAACTGGCATCTGGTGA2990.20550816877787934No Hit
CATAGACCACCGTGCCCAGATAAGTTACACTCTCAGTTGTGTGTGTGGTC2990.20550816877787934No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCAGCAACAAAAGTCA2900.19932230416583618No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTACACATAGAGAACAGCT2830.194511076134247No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACAGGGTGGGGAAAGAG2820.19382375784401998No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAGTCAGAACAGCTAAAAAT2780.1910744846831119No Hit
CATAGAATACAACACACTCTCTGCCCTGATGGTTCTGCACATCTACAAGG2770.1903871663928849No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT2760.18969984810265786No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT2760.18969984810265786No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACGGACTACAAGTACCCA2580.17732811887857147No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCTACACATAGAACAGCT2530.17389152742743638No Hit
CATAGATGCTTCTGATATGTTGCCGTAATTGGGGATGGCTGGTTGAATCT2510.17251689084698232No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2430.16701834452516615No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTAAGAATTTGCAAA2410.16564370794471212No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2400.16495638965448509No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA2380.16358175307403106No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT2370.16289443478380403No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTAGGACACTTTGGACTCT2250.1546466153010798No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2240.15395929701085276No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCCTTGGAGAGAAATGCTGCT2210.1518973421401717No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2210.1518973421401717No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAACAGGTGCA2150.14777343239880955No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTAGCAAACTAACACAG2150.14777343239880955No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCCCTCATTATCCCTGTGCCTC2140.14708611410858255No Hit
CATAGAAGTGACCCTCAGCTCAGTGATCTATGAGACCAAGTCTCTGCTAC2110.1450241592379015No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC2080.1429622043672204No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTAGGACACTTTGGACT2040.14021293120631234No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG2030.1395256129160853No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA2000.13746365804540425No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTGGCTGAGAAAGGAGGATC1970.1354017031747232No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1960.13471438488449616No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG1910.13127779343336105No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA1910.13127779343336105No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1880.12921583856267999No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT1860.12784120198222595No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTAGACCAAAGCTAGAAACTCCC1840.1264665654017719No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA1830.1257792471115449No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC1760.12096801907995575No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTTGCACATCTACAAGGAC1730.11890606420927466No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCGAGGCAGAGGACAGGTATCTATG1690.1161567910483666No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1680.11546947275813957No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT1650.11340751788745851No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1630.11203288130700445No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATCATGTCCTTTGCAGGGGCATGG1620.11134556301677745No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACCGATCTATGTCCTTGGAG1620.11134556301677745No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT1610.11065824472655042No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA1610.11065824472655042No Hit
CATAGAGAACAGCCCTGAGAGAATGCACTGACGACATGGTTCTACACATA1600.10997092643632339No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCAAGGGGTCCAGTGAACTCAA1590.10928360814609636No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA1580.10859628985586936No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT1560.1072216532754153No Hit
CATCTACAAGGACACTCATCTATGAGACCAAGTCTCTGCTACCGTACGAT1550.1065343349851883No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAGTCTGGAGACAGCCGCTC1530.10515969840473424No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1500.10309774353405318No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1480.10172310695359915No Hit
CATAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCTAC1470.10103578866337212No Hit
CATAGATGCTTCTGATATGTTGCCGTCATAGATGCTCAGATCTCAAAAGG1460.1003484703731451No Hit
CATAGATGTGCCACATACCTTTCCCAGTTCTTTTAGAACATTAGCTTAGT1460.1003484703731451No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)