FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145493
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1996413.721622346092252No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT56323.870976610558584No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG45743.1437938594983947No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA42762.9389730090107427No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA40352.7733293010660307No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT36012.4750331631075033No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG21671.489418734921955No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT20071.3794478084856316No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA15711.0797770339466504No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG15641.0749658059150613No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT15641.0749658059150613No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA15281.0502223474668884No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA15051.034414026791667No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA14500.9966115208291808No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC14130.9711807440907809No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG13360.9182572357433003No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC12490.8584605444935495No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT11720.8055370361460689No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT9970.6852563353563401No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9830.6756338792931619No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9510.6536396940058972No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA9370.6440172379427188No Hit
CATAGACCACACACACAACTGAGAGTACGGAAGACACAGCACACTCTTCT8850.6082766868509137No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8630.5931556844659194No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT8600.5910937295952382No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT8570.5890317747245571No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG8280.5690995443079736No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT7920.5443560858598008No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT7580.5209872639920821No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT7500.5154887176702659No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT7000.48112280315891487No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT6750.46393984590323933No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACAGGGCAGAGAGTGTGTTGT6610.45431738984006104No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6520.4481315252280178No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT6340.4357597960039315No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCTCTGTTTACTCGGAG6060.4165148838775749No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG6050.41582756558734785No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA5830.40070656320235337No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC5800.39864460833167237No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA5500.37802505962486166No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5450.3745884681737266No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG5390.3704645584323645No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTCTGTTTACTCGGAGA5210.35809282920827806No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGGTACGGCAACATATCAGA5190.356718192627824No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAGAACAACAATGCCT5120.3519069645962349No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA5100.3505323280157808No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5060.34778305485487276No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4990.3429718268232836No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA4710.323726914696927No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC4700.3230395964067No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTACCCCAGGTAGCAAAACAGAG4690.32235227811647293No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCTGTTTACTCGGAGATTTG4390.30173272940966234No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG4320.29692150137807316No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4130.28386245386375974No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGGAGACTTGGTCTCATAGAGGAG4080.2804258624126247No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA4030.27698927096148956No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC3980.27355267951035445No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAACCTCCCACCCCAGCTGTCTATG3930.27011608805921933No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA3860.2653048600276302No Hit
CATAGACCACACACACAACTGAGAGTACATAGACCTTTTTCTGTAGTCAA3840.26393022344717615No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA3690.25362044909377085No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGATAGCGAGAAGAGTGGAG3690.25362044909377085No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC3620.24880922106218167No Hit
CATAGACACACTGACAATTTGCACCTGTACATTCGATAGCGAGAAGAGTG3610.24812190277195464No Hit
CATAGATCCCATACTCCTCCATTACCCTAACAATGCCTCACACACAGGTC3570.24537262961104658No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG3490.2398740832892304No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC3400.2336882186771872No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAGGAATCT3390.23300090038696017No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG3350.2302516272260521No Hit
CATAGAGCAGCATTCTCTCAGGGCTGTTCTCTATGTGTAGAACCATGTCG3340.22956430893582508No Hit
CATAGAGCCCCCAGAGAAGAATGACCCATAGGAGGAGCTGACTTACTGTT3330.22887699064559805No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3310.22750235406514405No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGTTTACTCGGAGATTTGAC3290.22612771748469No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA3270.22475308090423593No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAGGAGCTGACTTACTGTTC3230.22200380774332787No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT3180.21856721629219272No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC3080.21169403338992254No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC3060.21031939680946848No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGGCCCCAGGTAGCAAAACAGAG2990.20550816877787934No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA2980.2048208504876523No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA2920.2006969407462902No Hit
CATAGACCACACACACAACTGAGAGTGTAACTTATCTGGGCACGGTGGTC2890.19863498587560915No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTACTCTGTTTACTC2800.19244912126356595No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTTTTCTGTTTACTCGGAGATTTG2780.1910744846831119No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2780.1910744846831119No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGACTTGGTCTCACTGAGCTGA2730.1876378932319768No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATAGAGGAGAATGATATTGTTGCA2710.18626325665152274No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT2650.18213934691016062No Hit
CATAGATTCAACCAGCCATCCCCAATTACGGCAACATATCAGAAGCATCT2540.17457884571766338No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2530.17389152742743638No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATCAGGGCAGAGAGTGT2490.1711422542665283No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCTGTTTACTCGGAGATTTG2470.16976761768607423No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2430.16701834452516615No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAGAAGTGTATTAA2390.16426907136425808No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2370.16289443478380403No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT2340.16083247991312297No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTAGGTTTTCTGTTTACTC2280.15670857017176085No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC2270.15602125188153382No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCA2270.15602125188153382No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCAGCATTCTCTCAGGGCTGTTCT2260.1553339335913068No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACTCTGTTTACTCGGAGATTTGAC2180.14983538726949064No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2110.1450241592379015No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2110.1450241592379015No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAATCTTTGGGAGGCTATTAGTC2080.1429622043672204No Hit
CATAGACACACTGACAATTTGCACCTGTTGGTCTCATAGAGGAGAATGAT2020.13883829462585828No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAGACTCTGTTTACTCGG1990.13677633975517722No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAGACTCTGTTTACTCGGAGATTTG1990.13677633975517722No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA1990.13677633975517722No Hit
CATAGATCACTGAGCTGAGGGTCACTTCTATGTGTAGAACCATGTCGTCA1980.1360890214649502No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1960.13471438488449616No Hit
CATAGAGTGATCCTCCTTTCTCAGCCACACTGAAGCAGAGGTAGATGGAT1920.13196511172358807No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA1890.12990315685290701No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1890.12990315685290701No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT1860.12784120198222595No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT1820.12509192882131787No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGGAATCTTTGGGAGGCTATTA1800.12371729224086381No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1760.12096801907995575No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG1740.11959338249950169No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT1740.11959338249950169No Hit
CATAGAGGTTTTCTGTTTACTCGGAGATTTGACTGTTCTATGTGTAGAAC1710.11753142762882063No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACTCTGTTTACTCGGAGATTTG1700.1168441093385936No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG1690.1161567910483666No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT1670.11478215446791254No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1650.11340751788745851No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1620.11134556301677745No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT1620.11134556301677745No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1570.10790897156564233No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGATAGCGAGAAGAGTGGAGGC1540.10584701669496127No Hit
CATAGAGGTGAGCGGCTGTCTCCAGACTCTATGCCCCAGGTAGCAAAACA1510.10378506182428021No Hit
CATAGAGCAGCATTTCTCTCCAAGGACATAGATCGGTAAGGAATCTTTGG1510.10378506182428021No Hit
CATAGAGCCCCCAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGA1490.10241042524382615No Hit
CATAGATGAGTGTCCTTGTAGATGTGTAGAACCATGTCGTCAGTGTAGAT1480.10172310695359915No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGACGGCAACATATCAGAAG1470.10103578866337212No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA1460.1003484703731451No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)