FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82277
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1345216.349648139820363No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA44435.400051047072693No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA42035.108353488824338No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG37444.550481908674356No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT30063.653511917060661No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA23122.810019811125831No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT16822.0443137207238964No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA14781.7963707962127935No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA14451.7562623819536445No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC14111.714938561201794No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG13851.6833379923915555No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC10871.321146857566513No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA10441.2688843783803492No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT8941.0865734044751267No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8691.0561882421575897No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8571.0416033642451719No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG8411.0221568603619482No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA8210.9978487305079183No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA7870.956524909756068No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA7320.8896775526574863No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT6920.8410612929494269No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA6860.833768853993218No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTAATGGAGGAGTATGGG5970.725597676142786No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA5750.6988587333033534No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA5740.6976433268106519No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG5740.6976433268106519No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT5510.6696889774785177No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT5300.6441654411317865No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT5100.6198573112777568No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAACAGCTAAAAATCTTGGAGCT4950.6016262138872346No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4740.5761026775405034No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA4280.5201939788762352No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG4190.5092553204419218No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC3910.47522393864628026No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA3880.4715777191681758No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3740.454562028270355No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT3620.4399771503579372No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG3550.4314693049090268No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA3540.43025389841632533No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3530.42903849192362387No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3530.42903849192362387No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG3530.42903849192362387No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT3280.39865332960608674No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG3260.3962225166206838No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG3100.37677601273746003No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAACATGTGTGAGAGGGAAGGACT3000.3646219478104452No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT2970.36097572833234076No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2760.3354521919856096No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2670.3245135335512962No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACACTGACGACATGTGTGAGAGG2600.31600568810238583No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2250.27346646085783394No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT2240.2722510543651324No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGAGAGGAGGGGGCAGAATATC2230.27103564787243095No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTGCAG2020.24551211152569977No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGAATGGAGGCCAAATGGCACATCA1990.2418658920475953No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1970.23943507906219233No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1970.23943507906219233No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGTGTGAGA1960.23821967256949086No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1890.22971182712058047No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1870.2272810141351775No Hit
CATAGATGTGGTCTCAGTGCCCTATGAACCAAAGGACACTTTGGACTCTG1740.21148072973005824No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC1500.1823109739052226No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGGCTGAGAAAGGAGGATCACTC1500.1823109739052226No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA1480.17988016091981962No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1470.17866475442711816No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTACACATAGAACAGCTAAAAATC1430.1738031284563122No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATCGTGCCTCTTGTAGAAGGGATG1420.17258772196361072No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1400.17015690897820776No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC1360.16529528300740182No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATCGTGCCTCTTGTAGAAGG1360.16529528300740182No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1310.1592182505438944No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAACAGTGAAACAAGATCG1280.15557203106578996No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1240.150710405094984No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1230.14949499860228255No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGTCATTCTTCTCTG1200.14584877912417807No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1200.14584877912417807No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGTAACAGAGAAGTCAAGAGGAAA1170.14220255964607362No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1150.13977174666067066No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1090.13247930770446176No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC1080.13126390121176026No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1080.13126390121176026No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATGAGACCAAGTCTCTG1060.1288330882263573No Hit
CATAGAGAACAGCCCTGAGAGAATGCATGGTTCTACACATAGAGAACAGC1060.1288330882263573No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACATGTGTGAGAGGGAAGGACT1010.12275605576284988No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTGGAGACAGCCG980.11910983628474543No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA970.11789442979204395No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT970.11789442979204395No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGATGCAGCAACAAA910.11060199083583505No Hit
CATAGAGGATCCCCTGACATTTTGGTTGTTCTGCACATCTACAAGGACAC910.11060199083583505No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA910.11060199083583505No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACTCTATGACATGTGTGAGAGGGA880.1069557713577306No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACATAGAACAGCTAAAAATCTT880.1069557713577306No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGGGCAGGCCCAGGCCTCGGGCGC880.1069557713577306No Hit
CATAGATCACCCAGCCCATATTGCAGCAACAAAAGTCACTCCTCTATGAG870.10574036486502912No Hit
CATAGAGAACAGCCCTGAGAGAATGAGAACAGCTAAAAATCTTGGAGCTC860.10452495837232761No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC860.10452495837232761No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCGGACTACAAG860.10452495837232761No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG850.10330955187962614No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCAGGGAAGCCCACACTTAGAAATG840.10209414538692464No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)