FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808261

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808261
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82277
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1330316.16855257240784No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT44075.35629641333544No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA42135.120507553751352No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG37444.550481908674356No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT29903.634065413177437No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA23182.8173122500820402No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT17092.0771296960268364No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA14741.7915091702419874No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14381.747754536504734No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA14081.7112923417236896No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG13761.6723993339572418No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC10591.2871154757708716No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA10451.2700997848730509No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT8771.0659114940992014No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8731.0610498681283955No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8651.0513266161867838No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG8241.0014949499860228No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT8190.9954179175225154No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT7990.9711097876684857No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7260.8823851137012774No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT6960.845922918920233No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT6830.8301226345151135No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG5980.7268130826354875No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC5750.6988587333033534No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA5670.6891354813617414No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG5570.6769814164347265No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT5510.6696889774785177No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT5300.6441654411317865No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT4940.6004108073945331No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT4910.5967645879164286No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4870.5919029619456226No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT4330.5262710113397425No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA4130.5019628814857129No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA3980.4837317840951906No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC3810.4630698737192654No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3800.4618544672265639No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT3680.4472695893141461No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT3560.4326847114017284No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3500.4253922724455194No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3470.4217460529674149No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA3460.42053064647471344No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG3430.416884426996609No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG3330.40473036206959423No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT3260.3962225166206838No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG3120.379206825722863No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACCCCAGGTAGCAAAACAGAGT3040.36948357378125113No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT2970.36097572833234076No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2750.3342367854929081No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT2620.3184365010877888No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCCAGGTAGCAA2530.30749784265347546No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2290.27832808682863985No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGAAGACACAGCACACTCTTC2280.27711268033593833No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT2270.27589727384323687No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2040.24794292451110275No Hit
CATAGAGTCCTTCCCTCTCACACATGTGGCCCAGTGATGGGCTACTGGGT2030.24672751801840123No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGACTTGGTCTCATAGAGGAGAAT1980.24065048555489385No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1950.23700426607678937No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1940.2357888595840879No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAAACATTGGAA1890.22971182712058047No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1840.22363479465707306No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT1810.2199885751789686No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTTGGTTCATAGGGCACTGAGACCA1740.21148072973005824No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA1720.20904991674465523No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATAGGAGGAGCTGACTTACTGTTC1530.18595719338332706No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC1520.18474178689062556No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1450.17623394144171517No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1450.17623394144171517No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAGGAGGAGCTGAC1440.1750185349490137No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1430.1738031284563122No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGCTCCTTCTCACACAA1410.17137231547090925No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTGTTTACTCGGAGATTTG1390.16894150248550627No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTGCATTCTCTCAGG1340.16286447002199886No Hit
CATAGAGGCACGATCTTGTTTCACTGTTTGGTCTCATAGGGCACTGAGAC1300.15800284405119291No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1270.15435662457308846No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1240.150710405094984No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1230.14949499860228255No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGTGCTTCCT1200.14584877912417807No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCCAGAGGAGAATGATATTGTTGC1200.14584877912417807No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1140.13855634016796917No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGGGCACTGAGACCACATCT1090.13247930770446176No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGCATT1070.1300484947190588No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTCCTTCCACTACCCACCTGCCT1050.1276176817336558No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1050.1276176817336558No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA980.11910983628474543No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT970.11789442979204395No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAAATACAAAACTTATCTGGGCA970.11789442979204395No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG910.11060199083583505No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA910.11060199083583505No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT890.1081711778504321No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATCTCATAGAGGAGAATGATATTG890.1081711778504321No Hit
CATAGAGCCCCCAGAGAAGAATGACCAAGCAGGGAAGGACCTCTGGGCAC880.1069557713577306No Hit
CATAGAGTCCTTCCCTCTCACACATGTCATAGAGTCCTTCCACTACCCAC870.10574036486502912No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACAACCAAAATGTCAGGGGA870.10574036486502912No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAATATGGGCTGGGTGATCTATGTG860.10452495837232761No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGGTCTCATAGAGGAGAATGATAT850.10330955187962614No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG840.10209414538692464No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATTCTCTCAGGGCTGTTCTC830.10087873889422316No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA830.10087873889422316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)