FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84124
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3655443.45252246683467No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG41554.939137463743997No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT25212.9967666777614No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT13071.5536588845038277No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG10271.220816889353811No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA10161.2077409538300605No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC9401.1173981265750559No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG7520.8939185012600447No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT7510.8927297798487946No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT7500.8915410584375446No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGATGAGGGTATAAGGTC6820.8107080024725405No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA6660.7916884598925397No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACAGACAGGATGCGCAGATGG6650.7904997384812895No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTACACTGCCATCACAGTTCA5770.6858922542912843No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG5260.6252674623175313No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC4560.5420569635300271No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA4460.5301697494175265No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG4210.5004517141362751No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT3930.46716751462127337No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT3590.4267509866387713No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT3470.41248632970377064No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAGAAAATACAAAAATTAG3410.40535400123627024No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTATATTTTCT3160.3756359659550188No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGCTGTCATGATTATCACCTTCTA3070.36493747325376824No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT2900.34472920926251727No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT2880.34235176644001714No Hit
CATAGAAGCATGGAAGACAAACAGCAGACAGGATGCGCAGATGGTCTATG2670.3173886168037659No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTATATTT2590.3078788455137654No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2540.30193523845751513No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACAGTTCATTGTATTCTCTATGAG2540.30193523845751513No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT2470.2936141885787647No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG2440.2900480243450145No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT2200.26151871047501307No Hit
CATAGAGGGTGCTCCTGTACTGGGTGCCATGATTGTAAGTTTCTTGAGTC2180.259141267652513No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG2130.25319766059626264No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA2060.24487661071751224No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1960.23298939660501167No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1880.22347962531501117No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1860.22110218249251104No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1840.2187247396700109No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCTATGTATCCTCT1820.21634729684751083No Hit
CATAGACACATGTAGGATGGGGTGGCACACACTTGCAGCTCCAGCTACTC1790.21278113261376064No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1780.21159241120251057No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1710.20327136132376017No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1690.20089391850126004No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1690.20089391850126004No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1610.19138414721125957No Hit
CATAGAAGCATGGAAGACAAACAGCAAAGCCCAGGGCAGAAAGGAAGTGA1550.1842518187437592No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT1540.18306309733250914No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1460.17355332604250867No Hit
CATAGATCCACAAAGACCAAGAGTGTCGTCAGTGTTGGAGGATGATCAAT1450.17236460463125863No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1440.17117588322000857No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCACTCTCTTGCCTTTTGCCATA1420.16879844039750844No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTGTGTTTGCTTTGTCGAAGA1420.16879844039750844No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1410.1676097189862584No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1390.16523227616375827No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1380.1640435547525082No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTATAAAAAATATGCAAAATTA1320.15691122628500784No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG1290.15334506205125767No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAAATACAAAAATTA1250.14859017640625743No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1170.13908040511625694No Hit
CATAGACACATGTAGGATGGGGTGGCTTACGTCTGTAATCCCAACATTTT1170.13908040511625694No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT1170.13908040511625694No Hit
CATAGAACCAAAAATGGCTAGGCATGTGTGTTCCATGTGTGTGCGATGTT1130.13432551947125673No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATAGCATGGTGGT1130.13432551947125673No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1110.1319480766487566No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT1090.1295706338262565No Hit
CATAGACACATGTAGGATGGGGTGGCTGTGCTGGGTAGTGGTAGTCTATG1080.12838191241500643No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1080.12838191241500643No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1070.12719319100375637No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1030.12243830535875612No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG1030.12243830535875612No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1020.12124958394750607No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1000.11887214112500594No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA990.11768341971375587No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC980.11649469830250583No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG980.11649469830250583No Hit
CATAGATGAAAGACAAGCAGGGAAGCACACTAACCACCTATCTACCCCCG980.11649469830250583No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG970.11530597689125577No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG960.1141172554800057No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG960.1141172554800057No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG950.11292853406875565No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGCAATCCCAGCACTTT940.11173981265750559No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA930.11055109124625552No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG930.11055109124625552No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC920.10936236983500545No Hit
CATAGAGCATTACCCTCAAACTATCCCTAACACTGCCATCACAGTTCATT910.10817364842375542No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC850.10104131995625504No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)