FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808269

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808269
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155818
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG118257.588982017481934No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG86025.52054319783337No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT83815.378711060339627No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT76094.883261240678227No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT56983.6568304047029225No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT47763.0651144283715617No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT47003.0163395756587814No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT46903.0099218318807837No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT41512.6640054422467236No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT38962.5003529759077896No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT31682.0331412288695785No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG24341.562078835564569No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG22421.4388581550270185No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG22251.427947990604423No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT19871.2752056886880847No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT19321.239908097909099No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT16981.0897328935039596No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT15941.0229883582127868No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG14510.9312146221874238No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC14100.9049018726976344No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT13400.8599776662516526No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT12130.7784723202710855No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA11220.720070851891309No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG11020.7072353643353142No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT10820.6943998767793195No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG10810.6937581024015197No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC10260.6584605116225339No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT10060.6456250240665391No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT9450.6064767870207549No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG9070.5820893606643648No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT9070.5820893606643648No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG8540.5480753186409786No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG8340.5352398310849837No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT8290.5320309591959851No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT7880.5057182097061957No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC7750.49737514279479905No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC7200.46207755201581335No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGTGCACAGTTTGGAATGACTCT6790.43576480252602395No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT6720.4312723818814258No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6670.4280635099924271No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAGAAAGAAAACCCACAAAA6420.41201915054743354No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG6290.4036760836360369No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6200.39790011423583926No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT6170.39597479110244005No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG6040.3876317241910434No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA5850.3754380110128483No Hit
CATAGACACTTGACCATGCCCTTGTTCTGACACTTGAAAGCTCCCTGGAT5820.3735126878794491No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATTGTCTCTCCCTCTCTCACACA5730.36773671847925143No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC5660.36324429783465323No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGCAGTTAGGCTACTTGGG5450.34976703590085867No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5280.3388568714782631No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT5010.3215289632776701No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4900.31446944512187297No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCTTTTACAAACTCAAGTGAT4860.311902347610674No Hit
CATAGAAAAGGGAGGGATTACGGGTGATGTTGTCCTCTTCACCTCCCAGA4850.31126057323287426No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4840.3106187988550745No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4680.30035040881027864No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT4600.2952162137878807No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC4570.2932908906544815No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4530.29072379314328256No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG4510.28944024438768307No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG4340.2785300799650875No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT4000.2567097511198963No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG3990.2560679767420965No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT3990.2560679767420965No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3900.2502920073418989No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCTGCTTTTACAAACTCAAGTGA3870.24836668420849967No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3730.23938184291930328No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC3690.23681474540810432No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA3470.22269570909651004No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3220.20665134965151652No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTAGAATCTTGAACTCAGGAGTC3100.19895005711791963No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTAACTTCGCCTGCCTTTCTCTAT3080.19766650836232016No Hit
CATAGACCAGGACAATCACAGGGCATTCTTTCTCCAGACCTTCATCTATG3040.1950994108511212No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2920.1873981183175243No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGGATCTCAGAGTTAGCTTGC2810.18033860016172715No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2770.17777150265052818No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA2720.17456263076152947No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG2720.17456263076152947No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT2520.16172714320553466No Hit
CATAGAGAAGGAAAACTGGGCTGTGGCATAGAACCTCAAGAAAGAAAACC2440.15659294818313674No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2430.155951173805337No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2410.15466762504973752No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC2380.15274230191633828No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACGGTTGCAGGATGAATGGGGAC2350.15081697878293907No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2240.14375746062714193No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2230.14311568624934218No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA2220.14247391187154243No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG2150.13798149122694425No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2150.13798149122694425No Hit
CATAGAGAAGGAAAACTGGGCTGTGGACAGGGGTGTGGTGTTCTGTCTAT2140.1373397168491445No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2120.13605616809354504No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC2090.13413084496014582No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTAGGTGGCTTCTGGTGCATCTAT1990.1277131011821484No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTGCTCACGATGGTATTACA1920.12322068053755023No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1880.12065358302635126No Hit
CATAGACCAGGACAATCACAGGGCACAGTTAGGCTACTTGGGGGTCTCTA1880.12065358302635126No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1850.11872825989295203No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG1810.11616116238175307No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGAACTTTCCCACCGCCCTTT1810.11616116238175307No Hit
CATAGATCCATGGTGTGCAAGGACAAAGCAGCAAACAATTTCAGAAAGTC1790.11487761362615359No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1780.11423583924835386No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGCAATTCTATGTGTAGAACCATGT1740.1116687417371549No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG1720.11038519298155541No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC1720.11038519298155541No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1700.10910164422595593No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTACGGTTGCAGGATGAATGG1670.1071763210925567No Hit
CATAGACCAGGACAATCACAGGGCACATGTACACGGCAGGACTGTCTATG1660.10653454671475697No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTCTGGTGCATCTATGTGTAGAAC1600.10268390044795853No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)