FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75019
Sequences flagged as poor quality0
Sequence length150
%GC49

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3557347.418653941001615No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG40245.363974459803517No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA29263.900345245871046No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG20742.764632959650222No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT13131.7502232767698849No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT10281.3703195190551727No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG8421.1223823298097815No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA5910.7878004238926138No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG5660.7544755328650076No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG5620.7491435503005905No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA5590.7451445633772777No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC5590.7451445633772777No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT5060.6744957943987523No Hit
CATAGACTCAAGAAACTTACAATCATGGCAAGGCTTGTGAGGGCTGAAGT4500.5998480384969141No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC3960.5278662738772844No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG3940.5252002825950759No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG3000.39989869233127606No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG2630.3505778536104187No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC2510.33458190591716763No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT2510.33458190591716763No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT2340.31192098001839536No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC2220.29592503232514433No Hit
CATAGACCATCCTCCCACCTTGACCTACGGTAGCAGAGGCACTTGGTCCA2180.2905930497607273No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA2130.28392807155520605No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2120.28259507591410177No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2020.2692651195030592No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1990.26526613257974646No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1890.25193617616870395No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAGAGGGGTGGAATTACAGGCA1890.25193617616870395No Hit
CATAGACCATCCTCCCACCTTGACCTCCGAAACTGCTAGGATTACAGGCA1870.24927018488649544No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1780.23727322411655713No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGTACTACAGGCA1780.23727322411655713No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1710.22794225462882733No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1700.2266092589877231No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1640.2186112851410976No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG1600.21327930257668057No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1530.2039483330889508No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1520.20261533744784654No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1450.19328436796011678No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1410.18795238539569975No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1330.17728842026686573No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1330.17728842026686573No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCAAGGCTTGTGAGGGCT1300.17328943334355296No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC1300.17328943334355296No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1290.17195643770244873No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG1290.17195643770244873No Hit
CATAGAGAATACAATGAACTGTGATGGCATTTGGAGGTGGGGCCTTTGGC1280.17062344206134444No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG1240.16529145949692745No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG1140.1519615030858849No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1130.15062850744478065No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1110.14796251616257217No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG1100.14662952052146788No Hit
CATAGACTACCACTACCCAGCACAGCCACCCCATCCTACATGTGTCTATG1070.14263053359815514No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGGCACTTGGTCCAGACT1060.14129753795705088No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1060.14129753795705088No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1050.13996454231594663No Hit
CATAGAAGCAGCATTGATCATCCTCCACGCCTGGCAGGGGTGGACACTCG850.11330462949386155No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCCCATCTTCTCCCACCCAGCCT840.1119716338527573No Hit
CATAGACTACCACTACCCAGCACAGCTCACTCACACATACACACAATCAC830.11063863821165305No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA780.10397366000613179No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA770.10264066436502753No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTGATGGGTTTTTGCCAGATA770.10264066436502753No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)