FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199230
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC118415.943382020780003No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA104565.24820559152738No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA87824.40797068714551No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC81724.10179189881042No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA59482.9854941524870755No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA56342.8278873663604878No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT54822.751593635496662No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA52362.628118255282839No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG39721.9936756512573408No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGACCTTTTAGCTATTAAGATGT38041.9093510013552175No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA37261.8702002710435175No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT34681.7407017015509711No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA29361.4736736435275812No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA27191.364754304070672No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG24601.234753802138232No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA23941.2016262611052553No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC22261.117301611203132No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC20611.0344827586206897No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG20611.0344827586206897No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG18690.9381117301611203No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA17800.8934397430105908No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT17150.8608141344175073No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT16920.8492696882999548No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA16160.811122822868042No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT15830.7945590523515536No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG14290.7172614566079405No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT14000.7027054158510264No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC13510.6781107262962405No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG13440.6745971992169854No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT12970.6510063745419866No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC12550.6299252120664558No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA12240.6143653064297545No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT12000.6023189278723083No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT11290.5666817246398634No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC10340.5189981428499724No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG10250.51448075089093No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT10200.5119710886914621No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG10020.5029363047733775No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC9790.49139185865582496No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC9630.48336093961752746No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT9100.4567585203031672No Hit
CATAGATTTGGCACTCACATACACGCCCCTTTACCTACCTTCTCAGCTCT8330.41810972243136074No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA8010.4020478843547659No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT7980.40054208703508504No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA7960.3995382221552979No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG7130.3578778296441299No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTTTTGGGGGAAGAGAAACA7050.3538623701249812No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6980.35034884304572605No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT6290.3157155046930683No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGCCAAGATTGTAGGAGTAGA6230.3127039100537068No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG6220.3122019776138132No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC6210.3117000451739196No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT6150.308688450534558No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6030.3026652612558349No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5990.3006575314962606No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA5940.29814786929679266No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA5640.2830898960999849No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGGATGACTTATGGAATCTGA5510.27656477438136823No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAGGATGACTTATGGAA5490.2755609095015811No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT5320.2670280580233901No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC5320.2670280580233901No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT5300.26602419314360287No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT5250.2635145309441349No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4990.2504642875069016No Hit
CATAGATGCCATAGACTTTAGGACAATAAGAGAACAATGGGCACACTTAA4570.2293831250313708No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCTACCGTAGAACAAGGGCATGGT4530.22737539527179643No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC4450.2233599357526477No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA4430.22235607087286052No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG4360.21884254379360538No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG4330.2173367464739246No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4300.21583094915424383No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGCTGGTGAAAAGTAGGGGACAG4220.2118154896350951No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC4210.2113135571952015No Hit
CATAGAGACCCCCAAGTAGCCTAACTGAGGTTCTTCAACACAGCTATTCT4190.21030969231541435No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACATCGGCCGCACTGAAATT4090.20529036791647842No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA4080.20478843547658485No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT4080.20478843547658485No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT4070.20428650303669127No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCTACCGTAAGGTTTTCCGGCTTG4040.2027807057170105No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGGCAAGTGTATGGTCAGTTCT3780.18973046227977716No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT3770.18922852983988353No Hit
CATAGATGCACCAGAAGCCACCTACCTGGCAAAAGGGTAAGAGTTCTATG3700.1857150027606284No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACAAGCACATTATTATTG3620.1816995432414797No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT3560.17868794860211815No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTGGTGGTGCTGGAACTAGTTCT3530.1771821512824374No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACAATGGGCACACTTAACAC3500.1756763539627566No Hit
CATAGATTTGGCACTCACATACACGCCTCTTACCCCTTTACCTACCTTCT3390.17015509712392712No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3360.16864929980424634No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA3360.16864929980424634No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCATCAGAGCATCACCCCTTCTAT3300.1656377051648848No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3270.16413190784520404No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTGAACAAGGGCATGGTCAA3150.15810871856648095No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG3130.15710485368669377No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGTCCTTGCACACCATGGATC3120.15660292124680017No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3110.1561009888069066No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA3050.15308939416754505No Hit
CATAGATCATGAATGACTCCCACTCTGCTACCGTACATCGGCCGCACTGA3020.1515835968478643No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3000.15057973196807709No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2930.14706620488882197No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGATTATTATACAAGCACATTAT2920.14656427244892836No Hit
CATAGAATTCCCCAATGTCCTGTGCAACACTGATCTAGCTTCGGAATGTT2920.14656427244892836No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCCCTCTCCCCAAAATTCTGCTCTAT2840.14254881292977967No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2740.13752948853084374No Hit
CATAGAATTCCCCAATGTCCTGTACAAACCAAACAATAGCCAGTCTATGA2740.13752948853084374No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT2680.1345178938914822No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2670.13401596145158862No Hit
CATAGATGGCATGTCACTTCCTCAGAGCCAGTGGGAGGAACAGGGAGATG2620.13150629925212065No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT2590.1300005019324399No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2570.1289966370526527No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT2460.12347538021382322No Hit
CATAGATGCACCAGAAGCCACCTACCTTCCCCTTTACCTACCTTCTCAGC2420.12146765045424886No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGAGGTTCTTCAACACAGCT2370.1189579882547809No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2360.11845605581488731No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG2330.11695025849520656No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAATCACTTGATCATCCATTGT2300.11544446117552577No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT2290.11494252873563218No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGGTTTTCCGGCTTGAGGTT2290.11494252873563218No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGATAAGTCACTCAAATATAGACC2290.11494252873563218No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTGGTGGTGCTGGAACTAG2260.11343673141595143No Hit
CATAGACCCCCATGCAACCACATCTATAGGAATTAGAGCCAGTTCTGAGT2230.11193093409627064No Hit
CATAGATTTGGCACTCACATACACGCACACTGACGACAAGCACATTATTA2220.11142900165637705No Hit
CATAGACAGAACACCACACCCCTGTCACACTGATCTAGCTTCGGAATGTT2210.11092706921648346No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT2080.1044019474978668No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2030.10189228529839883No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)