FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199230
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG119385.9920694674496815No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT105675.303920092355569No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT87994.416503538623702No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG80024.016463384028509No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT60023.0125985042413292No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT55612.791246298248256No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT54612.741053054258897No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT51262.572905686894544No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG39831.99919690809617No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTGCTTTTACAAACTCAAG38151.9148722581940472No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT36831.8486171761280934No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT36691.841590121969583No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC29641.4877277518446017No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT26911.3507001957536515No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG24491.2292325452994028No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT24011.2051397881845105No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG21851.0967223811674949No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG20611.0344827586206897No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG20571.0324750288611153No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG18820.944636851879737No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT17940.9004667971691009No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT17170.8618179992972945No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT16650.8357175124228279No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT16040.8050996335893189No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT15850.7955629172313408No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT13990.7022034834111328No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG13980.7017015509712393No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13940.6996938212116649No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG13240.6645585504191136No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT13030.6540179691813481No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC12610.6329368067058174No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT11950.5998092656728404No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA11830.5937860763941174No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT11190.5616624002409276No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC10280.5159865482106109No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC9880.49590925061486724No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG9780.49088992621593136No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG9770.4903879937760377No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC9660.4848667369372083No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT9080.45575465542338No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCGTGTATGTGAGTGCCAAATCT8330.41810972243136074No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT8090.4060633438739146No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT8050.4040556141143402No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA8050.4040556141143402No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA7420.372433870401044No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG7130.3578778296441299No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAACACTGCTCACGATGGTATTACA7090.35587009988455554No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT7040.35336043768508757No Hit
CATAGATCTACTCCTACAATCTTGGCAAAGCAGCAAACAATTTCAGAAAG6340.31822516689253627No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT6240.31320584249360034No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT6120.30718265321487725No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6110.3066807207749837No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC6070.30467299101540934No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC6040.3031671936957286No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5910.2966420719771119No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT5800.2911208151382824No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT5680.28509762585955933No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGCATTCTTTCTCCA5510.27656477438136823No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGCCAAGTAAGTCTACAAAGA5450.2735531797420067No Hit
CATAGAACTGACCATACACTTGCCCTCTGCTTTTACAAACTCAAGTGATT5370.269537720222858No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC5280.2650203282638157No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT5230.26251066606434775No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT5120.2569894092255182No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4830.24243336846860414No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGCAGTTAGGCTACTTG4590.23038698991115794No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTCTCTTATTGTCCTAAAGTCTAT4500.2258695979521156No Hit
CATAGAACTGACCATACACTTGCCCTTCTGTCTAGGATGAGATAATTGCC4500.2258695979521156No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC4420.22185413843296692No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4400.22085027355317977No Hit
CATAGAACTGTCCCCTACTTTTCACCAGCATGTCTCTCCCTCTCTCACAC4300.21583094915424383No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA4250.21332128695477587No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC4230.2123174220749887No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG4230.2123174220749887No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTTAGGCTACTTGGGGGTCTCT4180.20980775987552075No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT4140.20780003011594642No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCTGCTTTTACAAACTCAAGTGA4140.20780003011594642No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTTGCAGGATGAATGGGGAC4010.20127490839732973No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT3980.19976911107764894No Hit
CATAGAACCTCAAGCCGGAAAACCTTACGGTAGCAGTTAGGCTACTTGGG3910.19625558399839382No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAGGTGGCTTCTGGTGCATCTATG3770.18922852983988353No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTCAGAGTTAGCTTGCCTCT3730.1872208000803092No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT3710.186216935200522No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTCATAGAACTTTCCCACCG3690.18521307032073484No Hit
CATAGAACTAGTTCCAGCACCACCAGCATTCTTTCTCCAGACCTTCATCT3600.18069567836169254No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT3510.1761782864026502No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACGGTTGCAGGATGAATGGGGAC3470.17417055664307585No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAAGAGGCGTGTATGTGAGTGC3440.17266475932339506No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3360.16864929980424634No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3320.16664157004467198No Hit
CATAGAAGGGGTGATGCTCTGATGGACACTTGAAAGCTCCCTGGATCTAT3260.16362997540531043No Hit
CATAGATCCATGGTGTGCAAGGACAAAGCAGCAAACAATTTCAGAAAGTC3170.15911258344626814No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3160.15861065100637456No Hit
CATAGACACTTGACCATGCCCTTGTTCACACTGCTCACGATGGTATTACA3120.15660292124680017No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA3080.15459519148722584No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC3070.15409325904733223No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3050.15308939416754505No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT3010.1510816644079707No Hit
CATAGAACCAACCAATAATAATGTGCTTGTATAATAATCTGCTTTTACAA2980.1495758670882899No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTTGCACAGGACATTGGG2890.1450584751292476No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTAGCAGAGTGGGAGTCATT2880.144556542689354No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2850.14305074536967324No Hit
CATAGAGCAGAATTTTGGGGAGAGGGAACTTTCCCACCGCCCTTTTCTAT2840.14254881292977967No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT2790.1400391507303117No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAGGACATTGGGGAATTCTATGT2670.13401596145158862No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT2660.13351402901169504No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2620.13150629925212065No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT2610.13100436681222707No Hit
CATAGAACATCTCCCTGTTCCTCCCACTGGCTCTGAGGAAGTGACATGCC2580.12949856949254632No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2570.1289966370526527No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTGTACATGTACACGGCAGGAC2420.12146765045424886No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGAAGGTAGGTGGCTTCTGGTGCA2420.12146765045424886No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2380.11945992069467448No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG2360.11845605581488731No Hit
CATAGAACCTCAAGCCGGAAAACCTTGGGTAGAATCTTGAACTCAGGAGT2320.11644832605531297No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTATCCCACCTAAACTCCTG2280.11444059629573859No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCGTCAGTGTGCGTGTATGTG2260.11343673141595143No Hit
CATAGACTCAGAACTGGCTCTAATTCCTATAGATGTGGTTGCATGGGGGT2240.11243286653616423No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2230.11193093409627064No Hit
CATAGAGCAGACAATGGATGATCAAGTGATTCTGCTTTTACAAACTCAAG2230.11193093409627064No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTTGCAGGATGAATGGGGAC2200.11042513677658988No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTGACAGGGGTGTGGTGT2140.10741354213722834No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2050.10289615017818601No Hit
CATAGATGAGGGATGTAGGCTGTACACTACGGTTGCAGGATGAATGGGGA2000.10038648797871808No Hit
CATAGAACATCTCCCTGTTCCTCCCACTCTGCTTTTACAAACTCAAGTGA2000.10038648797871808No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)