FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88552
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA54026.100370403830517No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC33613.7955099828349446No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT32433.6622549462462732No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA31913.603532387749571No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG29203.2974975155840633No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA23332.6346101725539794No Hit
CATAGAGCCTCCACTCTTCTCGCTATCCTCTGCTACTGCTTATCTCCTGC21612.440374017526425No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA18092.042867467702593No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA17221.9446201102177252No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA14911.6837564368958353No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT14591.6476194778209412No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG13841.562923479989159No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT13751.5527599602493452No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA13261.4974252416659137No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG12521.4138585238052217No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG12191.3765922847592376No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA11281.273827807390008No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG11081.2512422079681995No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9021.0186105339235703No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA8520.9621465353690487No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG7980.9011654169301654No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG7930.8955190170747132No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC7890.8910018971903515No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA7680.8672870177974523No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7540.8514770982021863No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG7490.8458306983467341No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG7230.816469419098383No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT6720.7588761405727708No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA6620.7475833408618664No Hit
CATAGATGTGGTCTCAGTGCCCTATGGCCACTGCTTTTAAAAGTTTTGAC5760.6504652633480892No Hit
CATAGATGCTTCTGATATGTTGCCGTACTGAATATTGTACCATTATGAAC5370.6064233444755623No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC5150.5815791851115729No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5010.5657692655163068No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGATCTCCCTCATTATCCCTGT4820.5443129460655886No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCCTGAACCAACCTGCAGGGGCCT4580.5172102267594182No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT4520.5104345469328756No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACGGACTACAAGTACCCACCAC4500.5081759869906948No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT4380.4946246273376096No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC4280.48333182762670523No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT3780.4268678290721836No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACCTCTAACTTCATAGCACAT3780.4268678290721836No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA3730.42122142921673145No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG3690.4167043093323696No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC3590.4054115096214654No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG3500.39524798988165144No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG3440.3884723100551089No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCTGAGAAAGGAGGATCACTCT3310.3737916704309332No Hit
CATAGATGTGCCACATACCTTTCCCATTGGGGATGGCTGGTTGAATCTAT3280.37040383051766196No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG3270.36927455054657154No Hit
CATAGATGTGGTCTCAGTGCCCTATGCCTCTTGTAGAAGGGATGGTCTAT3220.36362815069111937No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC3150.3557231908934863No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC3070.34668895112476283No Hit
CATAGACTCTGTTTTGCTACCTGGGGACTACAAGTACCCACCACCTCTAT2940.33200831150058724No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2940.33200831150058724No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT2930.33087903152949677No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACTACAAGTACCCACCAC2920.32974975155840636No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA2880.3252326316740446No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2800.3161983919053212No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA2740.3094227120787786No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACATTAGCTTAGTTAATT2710.30603487216550723No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGGCTGAGAAAGGAGGA2620.2958713524256934No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG2610.29474207245460293No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2600.2936127924835125No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2590.29248351251242205No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA2530.28570783268587946No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG2530.28570783268587946No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGCACAACTGGCATCTGGTGATCTAT2450.27667359291715604No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2410.2721564730327943No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGTCATTCTTCTCTGGGGGC2360.26651007317734215No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC2350.2653807932062517No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC2340.2642515132351613No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT2330.2631222332640708No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAAGGGTGGGGAAAGAGA2310.26086367332189No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGACACTGACGACATGGCTC2290.2586051133797091No Hit
CATAGAGCCTCCACTCTTCTCGCTATCACACTGACGACACGGACTACAAG2270.2563465534375282No Hit
CATAGATCATGGGACTTCAGCATGGCAACATATCAGAAGCATCTATGTGG2220.25070015358207604No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC2220.25070015358207604No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGAACATTAGCTTAGTTAA2190.2473123136688048No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2170.24505375372662389No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGTAGAGACAGGGTTTCACTCTA2150.24279519378444303No Hit
CATAGATGATCCATCTACCTCTGCTTCAGCCTCCCAATGTACTGGTTCAG2100.23714879392899088No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGACGACATGTGTGAGAGGGAAG2040.23037311410244826No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC1950.2202095943626344No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCAGATCCTTGTCAACTCTT1940.21908031439154393No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGAGACCA1940.21908031439154393No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT1930.2179510344204535No Hit
CATAGATCATGGGACTTCAGCATGGCGACTTGGTCCAGTGAACTCAAGGG1910.21569247447827267No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT1890.2134339145360918No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGACACTTTGGACTCTGCCTCTA1880.21230463456500134No Hit
CATAGAGGATCCCCTGACATTTTGGTTGTCATAGACCAAAGCTAGAAACT1850.20891679465173005No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1850.20891679465173005No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCAAGGGGGTCTATGAGACCAA1850.20891679465173005No Hit
CATAGATGTGCCACATACCTTTCCCATCATCTTCCACTTGCCTACAGGTG1840.20778751468063963No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTTCTGTTTACTCATGTCTC1760.19875327491191613No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATACGGAGATAGAGAGGT1740.19649471496973528No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTACTGGTTTGTATTAGCTCAGAGT1720.19423615502755445No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTTGCCTTTCCTCAGTTCTTTTTCT1630.18407263528774054No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTTGCTGGGCTTGGCTTGGTTTCCC1600.18068479537446924No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG1540.17390911554792665No Hit
CATAGAGCCTCCACTCTTCTCGCTATCCCTGTGCCTCTTGTAGAAGGGAT1490.16826271569247447No Hit
CATAGATGCTTCTGATATGTTGCCGTCAGTGTGGTCATTCTTCTCTGGGG1480.16713343572138406No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGTTCTACACA1470.16600415575029362No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1460.16487487577920318No Hit
CATAGACCTGTGTGTGAGGCATTGTTTCAGGCCTGTTCACTCTGATGGTA1450.16374559580811276No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTTGCA1420.16035775589484147No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1380.1558406360104797No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGACGACATGGCTCA1350.1524527960972084No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG1340.151323516126118No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1330.15019423615502756No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGTGGCACATCAGGGTAATGG1280.1445478362995754No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA1280.1445478362995754No Hit
CATAGATGCTTCTGATATGTTGCCGTCAGTGTGGCTGAGAAAGGAGGATC1220.1377721564730328No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACACTGACGACATGGCTCA1220.1377721564730328No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTAGAACAGCTAAAAATCT1220.1377721564730328No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGCTCACAC1210.13664287650194237No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1180.13325503658867108No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATCCTCAAGGGACATTTAAA1180.13325503658867108No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT1170.13212575661758064No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA1140.12873791670430934No Hit
CATAGAAGTGACCCTCAGCACAGTGAAACAAGATCGTGCCTCTATGAGAC1110.12535007679103802No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCGGCTGAGAAAGGAGGA1100.1242207968199476No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACATGTGTGAGAGGGAA1100.1242207968199476No Hit
CATAGAAGGAGCTGGACTGGATGGACGCCGAGACCAGGGCTGCTGCTCGG1090.12309151684885716No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGTCATTCTTCTCTGG1060.11970367693558585No Hit
CATAGATGGAAATTTTTGGCCAGGCGCTGTGGCTCACACCTATAATCCCA1020.11518655705122413No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAGGACACTTT1010.11405727708013372No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAGTCTCTGCTACAGTGAA1010.11405727708013372No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAACACTGACGACATGGCTC970.10954015719577197No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGTCATTTAGCAAGTCCATTCTTC970.10954015719577197No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAACAGCCCTGAGAGAATGAGAAC960.10841087722468154No Hit
CATAGATCGGTAAGGAATTTGGCTCGAGGCAGAGGACAGGTATCTATGAG940.10615231728250067No Hit
CATAGATGTGGTCTCAGTGCCCTATGACACTGACGACATGGCTCACACCT930.10502303731141024No Hit
CATAGAACATCTACAGAACTCTCTACCCAACACTGACGACATGGCTCACA930.10502303731141024No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCGGTCATTCTTCTCTGGGG920.10389375734031982No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACTGACGACATGGTTCTACACAT910.10276447736922936No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCTTGAGCCTTTAGCCAATTGTTTA890.10050591742704852No Hit
CATAGAACAGTAAGTCAGCTCCTCCTAGAACATTAGCTTAGTTAATTAGG890.10050591742704852No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)