FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808276

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808276
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105373
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1234311.713626830402475No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA45704.336974367247777No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG36793.4914067170907157No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA32713.104210756076035No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA31803.017850872614427No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT27412.601235610640297No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG26062.4731193000104392No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG26022.469323261176962No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT23262.2073965816670307No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG16031.5212625625160145No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA13181.2507947956307592No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA12971.2308655917550035No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT12831.2175794558378332No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT11861.1255255141260094No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT11411.0828200772493901No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC11351.0771260189991745No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA10280.9755819802036575No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA9660.9167433782847598No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC9370.8892220967420497No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA8850.8398735919068453No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8560.8123523103641349No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA7950.7544627181536068No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTCCAGTGAACTCAAGGGGGTCT7540.7155533201104647No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTCATTCTTCTCTGGGGGCTCTA7110.6747459026505841No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT6700.6358365046074421No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC6370.6045191842312547No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGCCTCTTGTAGAAGGGATG6260.5940800774391921No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA6240.5921820580224535No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT5960.5656097861881126No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA5860.5561196891044196No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA5340.5067711842692151No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5310.5039241551441072No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGACCAAAGCTAGAAACTCCC5250.4982300968938912No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT5170.49063801922693673No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG5120.48589297068509013No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCGAGGCAGAGGACAGGTATCT4790.4545756503089027No Hit
CATAGACCCCATGTGCAGTGTAAGCTGCAGCAACAAAAGTCACTCCTCTA4670.44318753380847087No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAAGAATTTGCAAATACAGAATCA4470.4242073396410845No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT4280.40617615518206746No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG4060.38529794159794256No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCATAGAACAGCTAAAAAT3870.36726675713892554No Hit
CATAGACCTGTGTGTGAGGCATTGTTTAGACAGCTAGGGTGGGGAAAGAG3840.36441972801381756No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTCATTCTTCTCTGGGGGCTCT3820.36252170859707894No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA3740.3549296309301244No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3710.35208260180501644No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT3640.3454395338464312No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3610.3425925047213233No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACATAGACATGTGTGAGAGGGAA3550.3368984464711074No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG3360.31886726201209037No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC3360.31886726201209037No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3200.3036831066781813No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC3150.29893805813633473No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA3130.29704003871959606No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3100.29419300959448813No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3030.2875499416359029No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCACATCTACAAGGACACTCATCT3030.2875499416359029No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACATTAGCTTAGTTAATTAG3010.2856519222191643No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG3000.284702912510795No Hit
CATAGATGATCCATCTACCTCTGCTTCAACATAGATGCTCAGATCTCAAA2980.2828048930940563No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT2940.2790088542605791No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG2890.2742638057187325No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA2600.2467425241760223No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT2530.24009945621743708No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2460.23345638825885187No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT2460.23345638825885187No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTGTAGAACAGCTAAAAATCTTGGA2450.23250737855048256No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2420.22966034942537464No Hit
CATAGATGCTTCTGATATGTTGCCGTGATGCTCAGATCTCAAAAGGCTTC2390.22681332030026666No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG2370.22491530088352804No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2310.21922124263331214No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTAGGCTGAGAAAGGAGGATC2290.21732322321657352No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAGACCAAAGCTAGAAACTCCC2280.2163742135082042No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT2230.2116291649663576No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGAGAACAGCTAAAAATCTTGGA2200.20878213584124963No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2190.20783312613288032No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA2150.2040370872994031No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTACATGTGTGAGAGGGAAGGAC2120.2011900581742951No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2100.1992920387575565No Hit
CATAGATGCTTCTGATATGTTGCCGTAATAGATGCTCAGATCTCAAAAGG2070.19644500963244851No Hit
CATAGACCACCGTGCCCAGATAAGTTGACAGTGAAACAAGATCGTGCCTC2060.1954959999240792No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGGCACAACTGGCAT2060.1954959999240792No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTAGCACAACTGGCATCTGGT2050.1945469902157099No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGAGACAGCCGCTCACCTC2040.1935979805073406No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA2030.19264897079897128No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2020.19169996109060194No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA2010.19075095138223264No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTGGTGGAGGGCTTTGCTGT2010.19075095138223264No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC1930.1831588737152781No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGAATTTGCAAATACAGAA1910.18126085429853947No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAACTTAGCAACCTGTACATTT1900.18031184459017016No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTACGGAGATAGAGAGGTTGGTTCT1890.17936283488180083No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT1800.170821747506477No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1800.170821747506477No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT1790.16987273779810766No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTCTACACATAGACCAAAGCTA1770.16797471838136904No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCTATGAGCAAACT1750.1660766989646304No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG1710.16228066013115314No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC1690.1603826407144145No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG1660.15753561158930654No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC1650.15658660188093723No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATAGAACAGCTAAAAATCT1600.15184155333909066No Hit
CATAGATGCCTCAAAGAGCTGAAGACACAGCAGGGTGGGGAAAGAGAGCA1570.1489945242139827No Hit
CATAGATGCCTCAAAGAGCTGAAGACAATGCACATCTACAAGGACACTCA1560.14804551450561337No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCTGCACATCTACAAGGACAC1560.14804551450561337No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1560.14804551450561337No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTACACATAGAGAACAGCTAAAAA1540.14614749508887476No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1500.1423514562553975No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1480.14045343683865885No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1440.1366573980051816No Hit
CATAGATGTGCCACATACCTTTCCCACACGGACTACAAGTACCCACCACC1410.13381036888007364No Hit
CATAGATGTGGTCTCAGTGCCCTATGCTCAGATCTCAAAAGGCTTCTATG1380.13096333975496569No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAGAGCTACACATGTGTGAGAGGGA1370.13001433004659638No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCACTGACGACATGTGTGAGAGGG1360.12906532033822707No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTAAGAATTTGCAAATACAGA1330.12621829121311912No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGAGGGTGGGGAAAGAGAGCA1310.12432027179638049No Hit
CATAGATGCTTCTGATATGTTGCCGTCAGTGTGCACAACTGGCATCTGGT1260.11957522325453389No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC1200.11388116500431798No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATCAGTACTCTCAGTTGTG1200.11388116500431798No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC1180.11198314558757937No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGTGTGAG1160.11008512617084072No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGAGACCA1150.10913611646247141No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCTGGTGGAGGGCTTTGCTGTTTCT1140.1081871067541021No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1140.1081871067541021No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCACACTGACGACATGTGTGAGAG1110.10534007762899415No Hit
CATAGAGCTTTAAGACCTGTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT1090.10344205821225551No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATACATGTGTGAGAGGGA1080.1024930485038862No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1080.1024930485038862No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)