FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105373
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1183411.230580888842493No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT44114.186081823617056No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG35853.4021998045040003No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA31993.0358820570734437No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA31162.957114251278791No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT26512.5158247368870583No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG25392.409535649549695No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG25072.379167338881877No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT22022.089719377829235No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG14991.4225655528456056No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA12561.1919561937118617No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA12551.1910071840034924No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT12111.1492507568352426No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT11171.0600438442485267No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT10771.022083455913754No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC9980.9471116889525779No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT9920.9414176307023622No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA9450.8968141744090042No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA9130.8664458637411862No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT8420.7990661744469645No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA7970.7563607375703454No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG7600.7212473783606806No Hit
CATAGACCCCCTTGAGTTCACTGGACTACGGCAACATATCAGAAGCATCT7420.7041652036100329No Hit
CATAGAGCCCCCAGAGAAGAATGACCAACAATGCCTCACACACAGGTCTA6860.6510206599413512No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6350.6026211648145161No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC6100.5788959221052831No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA5990.5684568153132207No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT5810.551374640562573No Hit
CATAGACCATCCCTTCTACAAGAGGCATACGATAGCGAGAAGAGTGGAGG5770.5475786017290957No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5740.5447315726039877No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT5160.48968900951856736No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT5060.48019891243487417No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACGATAGCGAGAAGAGTGGAGG4930.4678617862260731No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA4900.4650147571009651No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4820.45742267943401066No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAAACATTGGAAAGATGGGGATCT4580.43464644643314704No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGCTTACACTGCACATGGGGTCTA4510.4280033784745618No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTACGGAAGACACAGCACA4420.4194622910992379No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT4400.41756427168249927No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG3970.3767568542226187No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCTCTGTTTACTCGGAGAT3890.36916477655566415No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT3800.3606236891803403No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT3770.35777666005523234No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTCTAAACAATGCCTCACAC3730.3539806212217551No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3660.34733755326316984No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT3560.3378474561794767No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGCCCCAGGTAGCAAAAC3530.3350004270543687No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3420.3245613202623063No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG3240.30747914551165856No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3120.29609102901122675No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC3040.2884989513442722No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGCAACATATCAG3020.2866009319275336No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT2960.2809068736773177No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2950.2799578639689484No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACAATGCCTCACACACAGGTCT2920.27711083484384047No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2890.2742638057187325No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTTGAAGCAGAGGTAGATG2860.27141677659362456No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG2860.27141677659362456No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG2840.2695187571768859No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT2770.2628756892183007No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA2610.24769153388439166No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG2580.24484450475928368No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT2510.23820143680069847No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2430.23060935913374395No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACACTAACCTCCCACCCCAGC2400.22776233000863597No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2400.22776233000863597No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2350.22301728146678942No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGTAGCTTACACTGCACATGG2350.22301728146678942No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2340.22206827175842006No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCACGGCAACATATCAGAAGCATC2330.22111926205005075No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2270.21542520379983485No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACACGGAAGACACAGCACACTC2190.20783312613288032No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTACCCCAGGTAGCAAAACAG2130.20213906788266442No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT2120.2011900581742951No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA2060.1954959999240792No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2030.19264897079897128No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2030.19264897079897128No Hit
CATAGAGTCCTTCCCTCTCACACATGTACACGGAAGACACAGCACACTCT2010.19075095138223264No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATTACGGCAACATATCAGAAG1980.18790392225712468No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1980.18790392225712468No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGTAGCTTACACTGCACATGG1970.18695491254875538No Hit
CATAGAGGCACGATCTTGTTTCACTGTCAACTTATCTGGGCACGGTGGTC1970.18695491254875538No Hit
CATAGATCACCAGATGCCAGTTGTGCCTCATAGAGCAGCATTCTCTCAGG1960.18600590284038604No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA1960.18600590284038604No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1950.18505689313201673No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA1920.18220986400690878No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTGTCTTCAGCTCTT1880.17841382517343152No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT1860.17651580575669287No Hit
CATAGAACCAACCTCTCTATCTCCGTAAGGAGGAGCTGACTTACTGTTCT1850.17556679604832356No Hit
CATAGAAACAGCAAAGCCCTCCACCACACTGAAGCAGAGGTAGATGGATC1840.17461778633995426No Hit
CATAGAGGTGAGCGGCTGTCTCCATACGATAGCGAGAAGAGTGGAGGCTC1830.17366877663158492No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACACGGAAGACACAGCACACT1790.16987273779810766No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA1740.1651276892562611No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT1720.16322966983952245No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1690.1603826407144145No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAAGGAATCTTTGGG1660.15753561158930654No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAGACTTGGTCTCATAGAC1660.15753561158930654No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA1640.15563759217256792No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC1640.15563759217256792No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCATAGAGGTTTTCTGTT1630.1546885824641986No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT1580.14994353392235202No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGATAGCGAGAAGAGTGGAGGC1570.1489945242139827No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGCTGTGTCTTCAGCTCTTTGAGGC1570.1489945242139827No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATTGTCTTCAGCTCTTTGAGGCA1520.1442494756721361No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGGCATTCTCTCA1510.1433004659637668No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACAGGGCAGAGAGTGTGTTG1490.14140244654702816No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1470.13950442713028954No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCAGGGCAGAGAGTGTG1410.13381036888007364No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1410.13381036888007364No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1390.13191234946333502No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTAGCTCTCTTGCTCCTTCTCAC1390.13191234946333502No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGAAAGGTATGTGGCACA1340.12716730092148842No Hit
CATAGAAGCCTTTTGAGATCTGAGCATAGGGCACTGAGACCACATCTATG1330.12621829121311912No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1320.1252692815047498No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGCCCCCAGGTAGCAAA1270.1205242329629032No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACATAGGAGGAGCTGACTTACTG1270.1205242329629032No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTACGGTAGCTTACACTGC1250.11862621354616458No Hit
CATAGATCACCAGATGCCAGTTGTGCACACTGACGGCAACATATCAGAAG1210.11483017471268732No Hit
CATAGACCACACACACAACTGAGAGTACTGATTCTGTTTACTCGGAGATT1170.11103413587921003No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC1160.11008512617084072No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGACCTTTTTCTGT1160.11008512617084072No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTGCATTCTCTCAGG1160.11008512617084072No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA1130.10723809704573277No Hit
CATAGACCACACACACAACTGAGAGTCACTGACAGGTCTTAAAGCTCTAT1070.10154403879551686No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)