FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111704
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2042018.280455489507986No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA52774.724092243787151No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA33583.0061591348564063No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT32192.8817231254028504No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA32142.877247009954881No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG28932.58988039819523No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC27092.425159349709948No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT20101.799398410083793No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC18401.6472104848528253No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA18211.6302012461505409No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG17161.5362028217431785No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA14551.3025495953591635No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA14081.260474110148249No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT14051.257788440879467No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA11731.050096684093676No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA10670.9552030365967199No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA9900.8862708586979875No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG8880.794958103559407No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG8720.7806345341259042No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8440.7555682876172742No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA7000.6266561627157488No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT5900.5281816228604168No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT5580.49953448399341116No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5500.4923726992766597No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT5460.48879180691828406No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGTGTAGAACTGGT5060.452982883334527No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA4920.440449760080212No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT4770.4270214137363031No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT4740.4243357444675213No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4710.4216500751987395No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA4540.40643128267564277No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA4370.39121249015254606No Hit
CATAGATGTGCCACATACCTTTCCCATCTCCCTCATTATCCCTGTGCCTC4320.3867363747045764No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA4240.37957458998782495No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA4180.3742032514502614No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3950.3536131203896011No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT3930.35182267421041324No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3910.35003222803122536No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA3810.3410799971352861No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC3690.33033732006015903No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT3530.31601375062665615No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3460.30974718899949866No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA3320.2972140657451837No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3070.2748334885053355No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA3030.27125259614695985No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGGGTGGGGAAAGAGAGCAC3000.26856692687817807No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2990.2676717037885841No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG2980.2667764806989902No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT2920.26140514216142663No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGCTGAGATTGGCCTGTG2840.2542433574446752No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2840.2542433574446752No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAATTTGCAAATACAGAATCAGT2750.24618634963832986No Hit
CATAGATGTGCCACATACCTTTCCCAGAACAGCTAAAAATCTTGGAGCTC2750.24618634963832986No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT2700.24171023419036022No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA2630.23544367256320275No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2570.23007233402563917No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA2540.2273866647568574No Hit
CATAGACCTGTGTGTGAGGCATTGTTACACTGACGACATGTGTGAGAGGG2460.220224880040106No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT2450.21932965695051204No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT2430.21753921077132424No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2420.2166439876817303No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGGTACACATAGACCAAAGC2390.21395831841294852No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2350.2103774260545728No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT2350.2103774260545728No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCTATGAGACCAGC2290.20500608751700924No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA2230.19963474897944566No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG2150.19247296426269425No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTGCACATCTACAAGGACACT2130.19068251808350642No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATAGACATGTGTGAGAGGGA2060.18441595645634892No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGACCAAAGCTAGAAACTCCC2020.18083506409797323No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTTTCCTCAGTTCTTTTTCTAT1990.17814939482919143No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG1980.1772541717395975No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1950.17456850247081573No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA1940.1736732793812218No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGGTAATGGAGGAGTATGG1900.1700923870228461No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTGGCTGAGAAAGGAGGATCACT1880.16830194084365824No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1800.16114015612690682No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT1770.15845448685812502No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG1760.15755926376853113No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1740.15576881758934327No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT1710.1530831483205615No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAAGAACAGCTAAAAATCTTGGA1700.15218792523096755No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGGTTCTACACATAGAGAACAGCT1670.14950225596218578No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1660.14860703287259186No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCTCCCTCATTATCCCTGTGCC1630.14592136360381006No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1620.14502614051421614No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGGTGGAGGGCTTTGCTG1600.1432356943350283No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTGTTCACTCTGATGGTACTTCTA1560.13965480197665256No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACGGAGATAGAGAGGTTGGTTCTA1540.13786435579746473No Hit
CATAGACCCCATGTGCAGTGTAAGCTTAGAACAGCTAAAAATCTTGGAGC1500.13428346343908903No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATCTACAAGGACACTCATCTAT1460.13070257108071331No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1450.1298073479911194No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGATGGCGCCCTTGAAGAAGGTGG1440.12891212490152545No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTAATGGAGGAGTATGGGATCT1440.12891212490152545No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1440.12891212490152545No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA1410.12622645563274368No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG1350.12085511709518011No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1340.1199598940055862No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCGAGGCAGAGGACAGGTATCTATG1300.11637900164721048No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCGTATGGTGGAGGGCTTTGCTGT1290.11548377855761657No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT1270.1136933323784287No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACATGTGTGAGAGGGAAGG1270.1136933323784287No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT1260.11279810928883477No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1210.10832199384086515No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGTGAAACAAGATCGTGCCTCT1200.10742677075127122No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA1160.10384587839289551No Hit
CATAGATCATGGGACTTCAGCATGGCCTGTTCACTCTGATGGTACTTCTA1150.10295065530330158No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)