FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808282

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808282
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159517
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2239314.038002219199209No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT123077.7151651548110864No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA75184.712977300225055No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG62293.904912955985882No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA49333.092460364726017No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA42402.6580239096773384No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG41752.6172759016280396No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC33342.0900593667132656No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA29261.8342872546499744No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA28301.774105581223318No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA26521.662518728411392No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATACGGAGATAGAGAGGTTG21131.3246237078179754No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA20801.3039362575775622No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT18931.1867073728818873No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA18141.1371828707912008No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT17981.1271525918867582No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT17681.1083458189409279No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA17101.0719860579123228No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT16451.031238049863024No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG16041.0055354601703894No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC15981.0017741055812233No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCACATAGAACAGCTAAAAATC15410.966041236984146No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA12960.8124525912598657No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT12250.7679432286214009No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT10910.6839396427966925No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAAGACCAAAGCTAGAAA10470.6563563758094748No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT10190.6388033877267No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT9780.6131007980340654No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9750.6112201207394823No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC9490.5949209175197627No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA9310.5836368537522647No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG8490.5322316743669954No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCAGCAACAAAAGTCA8150.5109173316950545No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG8130.5096635468319991No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC8030.5033946225167224No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA8000.5015139452221393No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA7610.47706514039256004No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA7570.4745575706664494No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7350.46076593717284053No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT7280.4563776901521468No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG6790.42565996100729075No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTCTTGTAGAAGGGATGGTCT6040.3786430286427152No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGAGAGGAGGGGGCAGAATATC5880.3686127497382724No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTCAGGTGCAAATTGTCAGTG5490.3441639449086931No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC5330.3341336660042503No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTAGAATTTGCAAATACAGA5160.3234764946682799No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGCTACCGTAGGGTGGGGAAAG5110.32034203251064153No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAGGACTACAA5000.3134462157638371No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT4970.31156553846925406No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA4900.3071772914485604No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG4780.29965458227022823No Hit
CATAGACCCCATGTGCAGTGTAAGCTATAGATGCTCAGATCTCAAAAGGC4480.280847809324398No Hit
CATAGAACAGTAAGTCAGCTCCTCCTAGAACAGCTAAAAATCTTGGAGCT4470.2802209168928703No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG4440.2783402395982873No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGTGTGAGAG4190.2626679288100955No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT3860.24198047856968224No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA3750.23508466182287782No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3750.23508466182287782No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT3740.23445776939135013No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG3670.23006952237065642No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3610.22630816778149038No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGTTCTGCA3540.22191992076079667No Hit
CATAGAATACAACACACTCTCTGCCCTGGAGACAGCCGCTCACCTCTATG3470.2175316737401029No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGCTACCGTAGGCTGAGAAAGG3450.21627788887704757No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTGGCTGAGAAAGGAGGATCA3450.21627788887704757No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG3210.2012324705203834No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT3000.18806772945830225No Hit
CATAGACCCTCCTATCCCTTTTCCCCATAGAACAGCTAAAAATCTTGGAG2920.18305259000608087No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGGGACTACAAGTACCC2700.16926095651247203No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2510.1573500003134462No Hit
CATAGAATACAACACACTCTCTGCCCTGTGGTTCTGCACATCTACAAGGA2450.1535886457242802No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2410.15108107599816947No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTAAACT2400.1504541835666418No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG2340.14669282897747576No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGGTTCTAC2330.14606593654594807No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2180.13666255007303296No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC2120.13290119548386692No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG2010.1260053787370625No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGAGGAGAGGAGGGGGCAGAATATC1940.12161713171636879No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA1920.12036334685331343No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAATCCTTCTATGAG1900.1191095619902581No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1840.11534820740109204No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT1790.11221374524345368No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1790.11221374524345368No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG1770.11095996038039833No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTTTGG1680.10531792849664927No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)