FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159517
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2221213.924534689092699No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT119507.4913645567557055No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT73924.633988853852567No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG63103.955691242939624No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA48553.043562755066858No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA42412.658650802108866No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG41512.6022304832713754No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC32582.0424155419171623No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA28531.7885241071484543No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA28431.7822551828331776No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA27101.698878489439997No Hit
CATAGAACCAACCTCTCTATCTCCGTATCTGTTTACTCGGAGATTTGACT21141.3252506002495033No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGGCAGAGAGTGTGTTGTATTCTA20621.2926521938100641No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT18421.154735858873976No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA18281.1459593648325883No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT18251.1440786875380053No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT18171.139063548085784No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT17231.0801356595221827No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT16191.0149388466433045No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC16191.0149388466433045No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGGAATCTTTGGGAGG15140.9491151413328988No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG15090.9459806791752604No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA13300.8337669339318066No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT12660.7936458183140356No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGATAGCGAGAAGAGTGGAGGC10670.6688942244400283No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT10210.6400571725897553No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTTTTCTGTTTACTCGGAGATTT10210.6400571725897553No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA9800.6143545828971207No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC9770.6124739056025377No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9710.6087125510133716No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT9460.5930402402251798No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATAGAGGAGAATGATATTGTTGCA8170.5121711165581098No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA8050.5046484073797777No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG8020.5027677300851947No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG7960.49900637549602866No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT7640.47894581768714306No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC7540.4726768933718663No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA7410.4645272917620066No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT7240.45387012042603614No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG7150.448228088542287No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGAAGACACAGCACACTCTTC5930.37174721189591076No Hit
CATAGACCATCCCTTCTACAAGAGGCAACCAAAATGTCAGGGGATCCTCT5850.3667320724436894No Hit
CATAGACACACTGACAATTTGCACCTGACACTGTCTTCAGCTCTTTGAGG5650.3541942238131359No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTGAAGCAGAGGTAG5290.33162609627813966No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA5120.32096892494216916No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGTAGCAGGAAACATTGGAAAG5030.3153268930584201No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT4870.3052966141539773No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCTACGGTAGCAGAGACCTTTTTCT4790.3002814747017559No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT4750.2977739049756452No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG4590.28774362607120246No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATAGCTTACACTGCACATGGG4490.2814747017559257No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGGAGGAGCTGACTTACTGTT4430.27771334716675966No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCAGGGCAGAGAGTG4300.2695637455568999No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA4250.26642928339926153No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT4100.2570258969263464No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT3850.24135358613815455No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3720.2332039845282948No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA3670.23006952237065642No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT3650.2288157375076011No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3590.22505438291843505No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATGTCGTCAGTGTCAGG3430.21502410401399225No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGTAGCAGGAAACATTGGAAA3410.21377031915093692No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3410.21377031915093692No Hit
CATAGAGTGATCCTCCTTTCTCAGCCACACTGTCTTCAGCTCTTTGAGGC3410.21377031915093692No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGCAGAGAGTGTGTTGTATTCTATG3390.21251653428788153No Hit
CATAGACCATCCCTTCTACAAGAGGCACATCTATGTGTAGAACCATGTCG3070.19245597647899595No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA3020.1893215143213576No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGGGAAAAGGGATAGGAGG2870.1799181278484425No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCATAGAGGAGAATGATATTGTTG2590.1623651397656676No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2550.15985757003955692No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2540.15923067760802925No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2490.15609621545039087No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCACAGGGCAGAGAGTGTG2370.1485735062720588No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG2330.14606593654594807No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTTAGAACCATGTCGTCAGTGTG2260.14167768952525436No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT2190.13728944250456065No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2130.13352808791539458No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA2080.13039362575775623No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCCTAACCTCCCACCCCAGCTGTC1930.12099023928484112No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1890.11848266955873042No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA1880.11785577712720274No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT1840.11534820740109204No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC1810.11346753010650903No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA1650.10343725120206623No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)