FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92065
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA45394.930212349970129No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG39704.312170748927388No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA38594.191603758214305No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA38504.181828056264596No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT36133.92440123825558No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA31513.422581871503829No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT30903.3563243360669093No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC23162.515613968391897No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG22082.3983055449953836No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA19022.0659316787052626No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA18762.0376907619616578No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG17881.9421061206756094No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA17171.8649866941834574No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA17171.8649866941834574No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT15171.647748873078803No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC12451.352305436376473No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA11211.2176179872915875No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG11001.1948080160755987No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG9451.0264487047194917No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG9050.9830011404985607No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8810.9569326019660023No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC8180.8885026883180361No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC7920.8602617715744311No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7460.8102970727203606No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG6670.7244881333840222No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6140.6669201107912888No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT5920.6430239504697768No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT5840.6343344376255906No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCAGAACAGCTAAAAATCTTG5490.5963178189322761No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG5480.5952316298267529No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG5460.5930592516157063No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAGAGCAGGGTGGGGAAAGAGAGCA5140.5583012002389617No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA5100.5539564438168685No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGCTCACAC5060.5496116873947754No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC5020.5452669309726823No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT4790.520284581545647No Hit
CATAGACGGGCCAGAGAATAGTGCTAGACACTGACGACATGGCTCACACC4630.5029055558572747No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATAGAACAGCTAAAAAT4590.49856079943518167No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGTAAACTTAGCAACCTGTAC4000.4344756422093086No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC3910.4246999402595992No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA3790.41166567099331997No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACTACACGGACTACAA3770.4094932927822734No Hit
CATAGATGCTTCTGATATGTTGCCGTGTAGAACAGCTAAAAATCTTGGAG3710.40297615814913373No Hit
CATAGATGTGCCACATACCTTTCCCACACTCCCTCATTATCCCTGTGCCT3630.3942866453049476No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC3600.3910280779883778No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATCTACAAGGACACTCATCTAT3430.3725628631944822No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT3390.3682181067723891No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGATAGAACAGCTAAAAA3340.3627871612447727No Hit
CATAGATGTGGTCTCAGTGCCCTATGCCTCTTGTAGAAGGGATGGTCTAT3240.35192527018954No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGAGAACAGCTAAAAATCTTGGAG3200.3475805137674469No Hit
CATAGAACATCTACAGAACTCTCTACCCATACGGAGATAGAGAGGTTGGT3180.3454081355564004No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC3110.33780481181773747No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG3100.3367186227122142No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTCTCAGTTGTGTGTGTG2980.32368435344593494No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC2980.32368435344593494No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGGACTACAAGTACCCAC2940.31933959702384185No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACGGACTACAAGTACCCACCAC2890.3139086514962255No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGCTCACACCT2890.3139086514962255No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGACATGGCTCACACCTATAAT2870.31173627328517894No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGCTCACACCT2770.3008743822299462No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG2760.29978819312442295No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGGTGGGGAAAGAGAGCAC2740.29761581491337646No Hit
CATAGACAGCTGGGGTGGGAGGTTAGACGGAGATAGAGAGGTTGGTTCTA2640.2867539238581437No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2620.28458154564709714No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC2560.27806441101395757No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT2550.27697822190843424No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT2500.2715472763808179No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT2450.2661163308532015No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGTAGAGACAGGGTTTCACTCTA2430.263943952642155No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT2390.25959919622006195No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC2350.2552544397979688No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT2330.25308206158692226No Hit
CATAGAGCCTCCACTCTTCTCGCTATCTCCCTCATTATCCCTGTGCCTCT2180.2367892250040732No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTCCTCTAACTTCATAGCACA2170.23570303589854993No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA2160.23461684679302666No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC2080.2259273339488405No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA2060.22375495573779394No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACACGGACTACAAG1990.21615163199913104No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG1970.2139792537880845No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1970.2139792537880845No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1960.21289306468256125No Hit
CATAGAGCTTTAAGACCTGTCAGTGACGGAGATAGAGAGGTTGGTTCTAT1900.2063759300494216No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC1830.1987726063107587No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGTGTGAGA1800.1955140389941889No Hit
CATAGATGTGCCACATACCTTTCCCATGTCCAGTGAACTCAAGGGGGTCT1770.19225547167761906No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA1750.19008309346657254No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGCTCACACCT1640.17813501330581655No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACATGGCTCACACCTATAATC1600.17379025688372346No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT1600.17379025688372346No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1600.17379025688372346No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGCTCACACCTATAATCCCAT1590.1727040677782002No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1580.17161787867267692No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1570.17053168956715364No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG1540.16727312225058383No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACACTGACGACATGGCTCA1520.16510074403953728No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC1470.15966979851192092No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1440.1564112311953511No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT1360.14772171835116493No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT1340.1455493401401184No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGGCTCACACCT1340.1455493401401184No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1270.13794601640145548No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT1250.13577363819040894No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGTTCTA1240.1346874490848857No Hit
CATAGAGAACAGCCCTGAGAGAATGGTTCTACACATAGAGAACAGCTAAA1200.1303426926627926No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1200.1303426926627926No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGGCT1200.1303426926627926No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCCTCGAGGCAGAGGACA1160.12599793624069952No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1140.12382555802965295No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA1120.12165317981860642No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAGAGGAGGGGGCAGAATATCTATG1100.11948080160755989No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCTAACTTCATAGCACATCAT1090.1183946125020366No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA1090.1183946125020366No Hit
CATAGAAGGAGCTGGACTGGATGGACACTGACGACATGGCTCACACCTAT1070.11622223429099006No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAGTGACTCTCAGTTGTGTGTGTGG1060.1151360451854668No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCAGCAACAAAAGTCACTCCTCT1060.1151360451854668No Hit
CATAGATCGGTAAGGAATTTGGCTCGAGGCAGAGGACAGGTATCTATGAG1060.1151360451854668No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTACACATAGAACAGCTAAAAATCT1060.1151360451854668No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGCTCACACCT1040.11296366697442024No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG1020.11079128876337371No Hit
CATAGACTCTGTTTTGCTACCTAGGGTGGGGAAAGAGAGCACTCTATGAG1010.10970509965785044No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGGTT1010.10970509965785044No Hit
CATAGAGAACAGCCCTGAGAGAATGAGAACAGCTAAAAATCTTGGAGCTC980.10644653234128063No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG970.10536034323575735No Hit
CATAGATGATCCATCTACCTCTGCTTCACGACATGGCTCACACCTATAAT950.1031879650247108No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTACACTGACGACATGGCTC950.1031879650247108No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACTGACGACATGGCTCACACC950.1031879650247108No Hit
CATAGAGGCAGGTGGGTAGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG930.10101558681366427No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA930.10101558681366427No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)