FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808286

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808286
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences196105
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2092310.669284311975726No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT128926.57402921904082No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA93664.77601285025879No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA73683.757170903342597No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG72163.6796614058795036No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT68123.47364932051707No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG67493.441523673542235No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA58943.005532750312333No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA53012.7031437240253946No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA34421.7551821728155836No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT33671.716937354988399No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA33641.7154075622753118No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG30991.5802758726192598No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC22121.127967160449759No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA21521.0973713061880115No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC19540.9964049871242447No Hit
CATAGACCTGTGTGTGAGGCATTGTTCTGCTGAGATTGGCCTGTGTCTAT19470.9928354707937074No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT18260.9311338313658499No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA17410.8877897044950409No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT17320.8832003263557788No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA17030.8684123301292676No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC16920.8628030901812805No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA15840.8077305525101349No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA15120.7710155273960378No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG14920.7608169093087886No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT14580.743479258560465No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC14480.7383799495168405No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA11360.5792815073557533No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG11350.5787715764513909No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC9890.5043216644144718No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT8630.440070370464802No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC8520.43446113051681495No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG8210.4186532724815788No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA7940.4048851380637924No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAACAGCTAAAAATCTTGGAGCT7870.4013156217332552No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7810.3982560363070804No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT7790.39723617449835547No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG7730.39417658907218067No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA7680.3916269345503684No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT7370.3758190765151322No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT7300.372249560184595No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG7050.3595012875755335No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG6760.34471329134902223No Hit
CATAGACTCTGTTTTGCTACCTGGGGACATAGACATGTGTGAGAGGGAAG6500.3314550878355983No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG6460.32941536421814843No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG6320.322276331557074No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG6140.31309757527854976No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA5910.3013691644782132No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGATGCTCAGATCTCAAAAGG5880.2998393717651258No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT5030.25649524489431685No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACTGACGACATGTGTGAGAGGGA4920.25088600494632973No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA4700.23966752505035568No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA4650.23711787052854336No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA4480.22844904515438158No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAGAACAGCTAAAAATCTTGG4360.2223298743020321No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4220.21519084164095767No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG4150.21162132531042044No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGTCTCATAGAGGCAGAGACCA4090.2085617398842457No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG4040.2060120853624334No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA3810.19428367456209683No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGCTGAGAAAGGAGGATCACTCTA3740.19071415823155963No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3740.19071415823155963No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATCGTGCCTCTTGTAGAAGG3700.1886744346141098No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAACTTAGCAA3540.18051554014431043No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT3480.1774559547181357No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT3360.17133678386578619No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT3190.16266795849162438No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC3090.15756864944799978No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3030.15450906402182504No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG3010.1534892022131001No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2960.15093954769128784No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2910.14838989316947554No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACGGACTACAAGTACCCACC2880.14686010045638814No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG2750.1402309986996762No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2660.13564162056041407No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACTACAAGTACCCACCACCTCTA2410.1228933479513526No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTGGAGACAGCC2390.12187348614262769No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACATAGAACAGCTAA2330.11881390071645291No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA2310.11779403890772801No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA2210.11269472986410341No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTAATGGAGGAGTATGGGATCT2160.11014507534229112No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTGGAGACAGCCG2100.10708548991611637No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTGGAGACAGC2040.10402590448994162No Hit
CATAGAGAATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA2020.1030060426812167No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC2010.10249611177685423No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGTCATTCTTCTCTGG1980.10096631906376687No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAATCCTTCTATGAG1970.1004563881594044No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)