FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808296

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808296
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73129
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG60358.25254003199825No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG47196.452980349792832No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA38345.2427901379753585No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA34644.736834908175963No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT25653.5075004444201343No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA23203.1724760354989128No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC20082.7458327065869903No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC16932.315087037973991No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG16012.189281953807655No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT12711.7380245866892752No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG8741.1951482995801939No Hit
CATAGACCATTTGCCGCGTTCTGAAGGCAGATCATGAGGTCAGGTCTATG8241.1267759712289243No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA7871.0761804482489847No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGGGTCCTTTTCACATCATCTATG6200.8478168715557439No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA5510.7534630584309918No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG5410.7397885927607378No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC5380.7356862530596616No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT5340.7302164667915602No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGGCAGATCATGAGGTCAGGTC5190.7097047682861792No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTTAGGTAGAGGAGTTTCAAA4900.6700488178424429No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG4700.6426998865019349No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGCATGTTGAGATGAATAA4590.6276579742646556No Hit
CATAGAAGATGGTCTGCTACACTGGTAGTAATGAGGGATTATCAGTAGTG4530.6194532948625032No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGGAGGGAAGGAAGGGCA4010.5483460733771828No Hit
CATAGAGGGGCATGCTGGATAAATCTACACTGAGCAGAGTTGGGTGTGTC3530.48270863815996384No Hit
CATAGAACTTTGTGCCCCCAGTGTCTATAGAAAACCACTTGAACATTGCC3450.47176906562376075No Hit
CNTAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG3260.4457875808502783No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC3220.4403177945821767No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA3150.4307456686129989No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAATTGTGGA3140.4293782220459736No Hit
CATAGACTCAAGCAATCCTCCCACCTATTCACCAAGTCACCCAGCCTCTA3120.42664332891192275No Hit
CATAGATCACCTACACAGACAGCTTTCCACACTCATGCAAAGCTGGTCTA3090.42254098921084654No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA3070.4198060960767958No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT3060.4184386495097704No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA3050.417071202942745No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG2980.40749907697356724No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTAGGTAGAGGAGTTTCAAACATCT2900.3965595044373641No Hit
CATAGACCCTTCTCCATGCCACATCATTACGGTGTCAGAGATAGCACAGT2770.378782699066034No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC2720.371945466230907No Hit
CATAGAGGTCGCAGCTACCCAGAAAGTGCAGCTATATTGGAGGAAAAGTC2720.371945466230907No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT2650.3623733402617293No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG2540.34733142802444994No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGGAAAGCAATCACCGCCAGTC2510.3432290883233738No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA2510.3432290883233738No Hit
CATAGATCATGCAAAGAACACAGGCCCAGCATGTTGAGATGAATAATTGA2490.340494195189323No Hit
CATAGAAGATGGTCTGCTACACTGGTGTTCCACACTCATGCAAAGCTGGT2450.33502440892122143No Hit
CATAGATCAACAATGGATGAGCAAAAGGTACTGAGCAGAGTTGGGTGTGT2440.333656962354196No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGACACTGACGACATGGTTCT2410.3295546226531198No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGAAAGCAATCACCGCCA2380.32545228295204365No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA2350.32134994325096744No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG2340.3199824966839421No Hit
CNTAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG2260.30904292414773893No Hit
CATAGACTCAAGCAATCCTCCCACCTAGCACCCTGAAGTTTGAGAGCAAG2230.3049405844466628No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA2080.28442888594128185No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA2080.28442888594128185No Hit
CATAGACTCAAGCAATCCTCCCACCTAGGAGCACCCTGAAGTTTGAGAGC2070.28306143937425643No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG2050.2803265462402057No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGCAGATCATGAGGTCAG2000.2734893134050787No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1990.2721218668380533No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGACAGCCGCTCACCTCTA1950.26665208056995177No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTGGAGGGAAGGAAGG1900.25981484773482477No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGCTAGTCCGTCACCCCTAAT1840.2516101683326724No Hit
CATAGACTCAAGCAATCCTCCCACCTATTGGAGTCCTGGCATATACAAGG1790.24477293549754545No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTTTTTCCAAATATAAGAT1730.2365682560953931No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTTGTACAGCATGTTGAGATG1720.2352008095283677No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCACTGACGGAGTGAGGGCAG1670.2283635766932407No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAACCCTGAA1640.22426123699216452No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT1630.22289379042513915No Hit
CATAGAACTTTGTGCCCCCAGTGTCTACGGGGGCAGATTAACAGGTCATC1620.22152634385811373No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC1610.22015889729108834No Hit
CNTAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA1580.21605655759001216No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT1580.21605655759001216No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGTCGCTAATAGTTTTTCCAA1580.21605655759001216No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1530.2092193247548852No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1490.20374953848678362No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTACACTTTAAAACCACTTG1440.19691230565165668No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAAGGCAGAT1420.19417741251760587No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC1400.19144251938355508No Hit
CATAGATCATGCAAAGAACACAGGCCCCACCCTTATGATCGTATCTATGA1380.1887076262495043No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC1350.18460528654842812No Hit
CATAGACTCAAGCAATCCTCCCACCTACCCTGAAGTTTGAGAGCAAGTTC1300.17776805371330115No Hit
CNTAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA1180.16135869490899643No Hit
CNTAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT1160.15862380177494564No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA1130.15452146207386946No Hit
CATAGATCAACAATGGATGAGCAAAAGGGAGGGAAGGAAGGGCAAACTCT1130.15452146207386946No Hit
CATAGAGGTCGCAGCTACCCAGAAAACCACTTGAACATTGCCTTTCTATG1110.15178656893981868No Hit
CNTAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC1100.15041912237279328No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAAGTCCTGGCATAT1090.1490516758057679No Hit
CATAGACACCTGGATCCTGTGTTGTCTACACTGGAGACAGCCGCTCACCT1050.14358188953766632No Hit
CATAGATCACCTACACAGACAGCTTTCCACACTGACGACATGGTTCTACA1040.14221444297064093No Hit
CNTAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC1040.14221444297064093No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGTCTTCTGTGTTTGGTCTATGAG1030.14084699640361553No Hit
CATAGACTCAAGCAATCCTCCCACCTGAGGAGCACCCTGAAGTTTGAGAG1020.13947954983659014No Hit
CATAGATGTGGCTATGCAGACTGAGTCCTGGCATATACAAGGTGTCTATG1020.13947954983659014No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCTTCTTATAGCCAGTGTCTCCCC960.13127487043443778No Hit
CATAGACCCTTCTCCATGCCACATCATCCCATGGGTCCTTTTCACATCAT940.128539977300387No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA890.12170274446526003No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAATCAATGCTAGTCCCCCAC860.11760040476418385No Hit
CATAGATCATGCAAAGAACACAGGCCATTCACCAAGTCACCCAGCCTCTA800.10939572536203149No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC800.10939572536203149No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA770.10529338566095531No Hit
CATAGATCATGCAAAGAACACAGGCCGGAGCACCCTGAAGTTTGAGAGCA760.1039259390939299No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAGCTATATTGGAGGAAAAGT760.1039259390939299No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)