FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113570
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1383012.17751166681342No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG74556.564233512371224No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG58275.130756361715242No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC55734.907105749757858No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG50714.46508761116492No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA45784.030994100554723No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA31592.7815444219424146No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG30022.643303689354583No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA26992.3765078806022717No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT26372.321915998943383No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT20531.8076956942854625No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT18731.6492031346306242No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA18511.6298318217839218No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG15681.3806462974377036No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC15371.3533503566082592No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA15111.330456986880338No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC14131.2441665932904817No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA13261.1675618561239764No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT13131.1561151712600157No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA12531.1032843180417364No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT9710.8549793079158229No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA9330.8215197675442457No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA8780.7730914854274896No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG7160.6304481817381351No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC7160.6304481817381351No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA7020.6181209826538698No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG6510.5732147574183323No Hit
CATAGATCAAGGAAAACACCAGCCCATGCAAACTGTTCTAGGCAGAAGAA6260.5512019019107158No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT6140.54063573126706No Hit
CATAGATGGCCAAGATACGAGCACATGCTGAAGTGATGGGCTAGATCTAT5690.5010125913533504No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGCTATACCACACTACA5650.49749053447213176No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5560.48956590648938975No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC5520.4860438496081712No Hit
CATAGACCAGCAGACACTCCCATCATGCTGAAGTGATGGGCTAGATCTAT5400.47547767896451526No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGACGCTATACCACACTACA5080.4473012239147662No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGAGGAGCTGAGTCATGGG5080.4473012239147662No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGATCATTGTTCACTGC5060.4455401954741569No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT5050.44465968125385225No Hit
CATAGATGGCCAAGATACGAGCACATACACTGCCCTCTCTGCTGTTCCTT4880.42969093950867304No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT4840.4261688826274544No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT4710.4147221977634939No Hit
CATAGATGAGGACACCATAAAGACAACATGATGCTGAAGTGATGGGCTAG4560.40151448445892396No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACCCTGCAGTCTTTGGAGG4520.3979924275777054No Hit
CATAGATCACGTAGAAACTGGAGAGGCCAGTGCAGTGGGGAGGCAGGCTG4320.38038214317161223No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGCCCTCTCTGCTGTTC3960.34868363124064455No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA3850.33899797481729327No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT3620.3187461477502862No Hit
CATAGATGGCCAAGATACGAGCACATCTGACGACATGGGCCCCAGTGTGA3270.28792815003962313No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATCATCAGGAACCATG3110.2738399225147486No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATGATGCTGAAGTGATGGGCTA3100.272959408294444No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA3100.272959408294444No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3070.27031786563353No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC2920.2571101523289601No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2900.2553491238883508No Hit
CATAGAGAAGACTCCCTCAACCCACCACGCTGTCCTTCTCTGAATCTATG2800.2465439816853042No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2660.23421678260103898No Hit
CATAGAAGCCATGAACACAGGATTGAACACTGACGCTATACCACACTACA2610.2298142114995157No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTCTTACCCTTCCCCACACCCTC2570.2262921546182971No Hit
CATAGATGTGTAGCCTGGGTCTGACATTGCTTCTTGTGGTAACTGGTCTA2490.2192480408558598No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG2450.2157259839746412No Hit
CATAGACCTCCGACAGTTTTTATGCACCGTACGATCATTGTTCACTGCAG2440.21484546975433652No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2380.2095623844325086No Hit
CATAGACATTTAATCCTCACAATGACCCATGTCGTGCTGAAGTGATGGGC2350.2069208417715946No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGGCTAATCTGAAATCTT2340.20604032755128995No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT2340.20604032755128995No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGCCCTCTCTGCTGTTCCTT2300.2025182706700713No Hit
CATAGACCGCTTCCCAATTTTTGTAACACATAGAGATCCCACCATTTGCC2270.19987672800915735No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA2040.17962490094215022No Hit
CATAGAGAAGACTCCCTCAACCCACCCTTGGTCCCAACTGTCTCTGAAAA2020.1778638725015409No Hit
CATAGATGGCCAAGATACGAGCACATACTTGGTCTACCAGTTATTAGTTG1980.17434181562032228No Hit
CATAGAAAAAACAGTTGGCCAGGCATCGTCCCAACTGTCTCTGAAAAATT1970.17346130140001761No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT1910.16817821607818967No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1910.16817821607818967No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGACATTGCTTCTT1890.16641718763758034No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1750.15408998855331515No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTTCTCCCAAGTATTAGAGCA1670.14704587479087788No Hit
CATAGACATTTAATCCTCACAATGACCCATCACTTCATCAGGAACCATGG1580.13912124680813595No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTAGAGATCCCACCATTTGCC1510.13295764726600334No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGCTCAGGTATGTCTTTATTAGCT1410.12415250506295676No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1410.12415250506295676No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTCTACAAAGGATTCTGGGC1380.1215109624020428No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1370.12063044818173814No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG1360.11974993396143348No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTGTGCACCTTCATTGTTGCTCTA1360.11974993396143348No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG1330.11710839130051949No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT1330.11710839130051949No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTCTGGTGCATTACAGAGAG1320.11622787708021486No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGATCTACAAAGGATTCTGGG1300.11446684863960553No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTAGAGATCCCACCATTTGC1230.10830324909747292No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGAGACAGCCGCTCACCT1190.1047811922162543No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGACATGGTTCTACACAT1180.10390067799594964No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1150.10125913533503565No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)