FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74244
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1406118.938904153871018No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT34704.6737783524594585No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG30574.117504444803621No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA28673.8615915090781745No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT23523.1679327622434137No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA22533.034588653628576No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC15382.0715478691880826No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT12291.655352621087226No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA11381.5327837939766176No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA10711.4425408113786973No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA8931.2027907979095955No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA8551.1516082107645063No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA8321.1206292764398469No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7841.0559775874144712No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT7320.9859382576369807No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA7200.9697753353806368No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA7180.9670815150045795No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT7160.9643876946285221No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG6720.905123646355261No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC6280.845859598082No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT6110.8229621248855127No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG5760.7758202683045095No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT5110.6882711060826464No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA5000.6734550940143311No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT4970.6694143634502451No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT4470.602068854048812No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA4450.5993750336727547No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC4060.546845536339637No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGGAGGAGCTGACTTA3800.5118258714508916No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG3680.49566294919454773No Hit
CATAGAACCAACCTCTCTATCTCCGTATGTCTTCAGCTCTTTGAGGCATC3680.49566294919454773No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3560.4795000269382037No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG3520.47411238618608914No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCGGAAGACAC3490.47007165562200315No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT3460.46603092505791716No Hit
CATAGACCCCCTTGAGTTCACTGGACTACGGCAACATATCAGAAGCATCT3230.43505199073325795No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGCCCCAGGTAGCAAAACAGAGT3030.40811378697268463No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT3030.40811378697268463No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGGCATTCTCTCAGGG3000.40407305640859864No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC2890.38925704434028335No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT2860.3852163137761974No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC2720.36635957114379614No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT2700.3636657507677388No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTAGGAAACATTGGAAA2620.3528904692635095No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2580.34750282851139486No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2520.33942136738322287No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2510.33807445719519424No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT2460.33133990625505094No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT2420.32595226550293627No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2400.32325844512687896No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGTTTTCTGTTTACTCGGAGATTT2360.3178708043747643No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC2360.3178708043747643No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT2310.311136253434621No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2300.30978934324659235No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA2290.30844243305856367No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACATAGACCTTTTTCTGTAGTCAA2050.27611658854587573No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTGAAGCAGAGGTAGATGGAT2030.2734227681698185No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC1880.2532191153493885No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTGTCTTCAGCTCTT1850.24917838478530252No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA1810.24379074403318787No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT1760.23705619309304457No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA1680.22628091158881525No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT1650.22224018102472926No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1640.2208932708367006No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAACTTATCTGGGCA1640.2208932708367006No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGGAGGAGCTGA1590.2141587198965573No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG1590.2141587198965573No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1540.207424168956414No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC1490.20068961801627067No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1440.19395506707612736No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC1430.1926081568880987No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT1390.18722051613598406No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1370.18452669575992675No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTGCTCCTTCTCACACAAATCT1350.1818328753838694No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1280.17240450406766877No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT1250.16836377350358278No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1250.16836377350358278No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTTCTACACATAGACTCTGTTTA1230.16566995312752547No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATACGATAGCGAGAAGAGTGGAG1210.16297613275146813No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGGCATTCTCTCA1210.16297613275146813No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT1210.16297613275146813No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1210.16297613275146813No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1200.16162922256343948No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCCCCAGGTAGCAAAACAGAG1180.15893540218738214No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCTATGAGGAGGAGCTG1150.15489467162329618No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1100.14816012068315285No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC1090.1468132104951242No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATTCTCTCAGGGCTGTTCTCTATG1090.1468132104951242No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCCAGGGCAGAGAGTGTGT1030.1387317493669522No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT1020.13738483917892355No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1010.1360379289908949No Hit
CATAGAGGCACGATCTTGTTTCACTGTTCTCATAGGGCACTGAGACCACA990.13334410861483756No Hit
CATAGACCATCCCTTCTACAAGAGGCAGACATGGAGACGTTTTTGGCCCC980.1319971984268089No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC960.12930337805075157No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG940.12660955767469426No Hit
CATAGAAACAGCAAAGCCCTCCACCACCAACCAGCTGTGACTGTTGAGTG940.12660955767469426No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA820.1104466354183503No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGACTTGGTCTCATAGAAGTGTATT810.10909972523032163No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGAAGTGTATTAAT770.103712084478207No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCGCATTCT750.10101826410214966No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA750.10101826410214966No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)