FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences260129
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA2715010.437129270477339No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC158936.109660975900419No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG156256.006635169473607No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG141005.420387576932983No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA99113.8100327145377872No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG88763.4121532009118556No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA85823.29913235356304No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC72972.8051466772255305No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT64872.4937627100400186No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA60792.3369174524947236No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA58482.248115358149226No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG57492.210057317715441No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT43091.6564858204967534No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC42771.6441842316696715No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT41141.5815230135817229No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA37061.424677756036428No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC32371.2443825947895082No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT31661.2170884445794201No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGTTTCCCCACTCAAAT25910.9960442703427915No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG21020.8080606160789455No Hit
CATAGAAGGACAAAGACATTTAGGACCCCTGCAGTCTTTGGAGGAATCTA21010.8076761914280991No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA20960.8057540681738676No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG20560.7903770821400152No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC19900.7650050551841586No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA17880.6873512757132039No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT17120.6581350022488842No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA16600.638144920404876No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC16160.6212302357676384No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT14920.5735615790626958No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA14060.5405010590899131No Hit
CATAGAGTCCAACTATTCCAGCACCATTCACAAGGGGTAAGGCGTACTGG12410.47707099170027184No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA11830.45477436195118576No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC11570.4447793210291817No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA11380.4374752526631017No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG11180.4297867596461755No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA10840.41671632151740096No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGCTATACCACACTACAC10440.40133933548354855No Hit
CATAGACCAGCAGACACTCCCATCATTACACTGACGATCATTGTTCACTG10410.40018606153100955No Hit
CATAGACACAACAGAGAGAACGGGCTGGTGCATTACAGAGAGGAGATCTA10350.39787951362593177No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATAGCAGCATAATTTCCCATGT10310.39634181502254645No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG9850.3786582810836162No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGCCCTCTCTGCTGTTCCTT9770.37558288387684574No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT9390.3609747471446859No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG9200.35367067877860603No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACTGTGTGCTTGAACCAG8790.33790926809390726No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGCTGAAGTGATGGGCTAG8700.3344494462362904No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGCCCTCTCTGCTGTTCCT8370.3217634327583622No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG8100.3113839671855118No Hit
CATAGAGCTTGGGCGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA7950.30561759742281713No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA7610.29254715929404257No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT7100.27294150210088075No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG6960.26755955698903233No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG6900.2652530090839545No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG6710.2579489407178746No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT6240.239880982128098No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT5960.22911709190440127No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTGTTTCCCCACTCAAATACCA5880.2260416946976308No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCCTTCCCCACACCCTCTT5860.22527284539593817No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCACGCTATACCACACTACA5830.22411957144339925No Hit
CATAGATGTGTAGCCTGGGTCTGACACCGTATGCTGAAGTGATGGGCTAG5800.2229662974908603No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGATCATTGTTCACT5660.21758435237901197No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGAGACAGCCGCTCACCT5420.20835816075870048No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT5350.20566718820277632No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCATAGAGTGTCTGTTTCCCCAC5280.20297621564685214No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT4740.18221728450115135No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGCCCTCTCTGCTGTTCC4670.17952631194522717No Hit
CATAGATCAAGGAAAACACCAGCCCATACGGTAGCAGCATAATTTCCCAT4570.17568206543676407No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT4560.17529764078591775No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTCTGAGGAGAATTCAAGC4440.17068454497576202No Hit
CATAGACGGATTATTCTCTCCATGGTCTACAAAGGATTCTGGGCCATCTA4370.16799357241983787No Hit
CATAGACGGATTACTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC4260.16376490126052842No Hit
CATAGACCAGCAGACACTCCCATCATTTGCCATGCTGAAGTGATGGGCTA4240.16299605195883582No Hit
CATAGAGAAGACTTCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG4230.1626116273079895No Hit
CATAGAAATGATGCTGAAGGGCCTGATGCTGAAGTGATGGGCTAGATCTA4140.1591518054503727No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATTGCTTCTTGTGGTAAC4100.15761410684698746No Hit
CATAGAGCTTTTTTTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG3910.15031003848090754No Hit
CATAGACTCATTGCACTTTCCACAACTGTCGTCCCAACTGTCTCTGAAAA3880.14915676452836862No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCTTCCTTTTCTGCCTTCATC3760.1445436687182129No Hit
CATAGATCCACGTGAGAATAAAGCATACACATGTTCTTCCTTTTCTGCCT3750.14415924406736658No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG3650.14031499755890348No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT3600.13839287430467193No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGACATGGTAGAGATCCC3250.12493801152505103No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT3150.12109376501658793No Hit
CATAGAAAAAACAGTTGGCCAGGCATCGGACATGCCAGGAATCAATGTTC3110.11955606641320267No Hit
CATAGACTCATTGCACTTTCCACAACTGTCAAGGGGTAAGGCGTACTGGT3060.11763394315897112No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA3010.11571181990473957No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTTTTTGTGCACCTTCATTGTTGC2910.11186757339627647No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGATCATTGT2830.10879217618950598No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2830.10879217618950598No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACTGTCTGCCTCTAAGTAA2640.10148810782342607No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)