FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808323

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808323
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences260129
Sequences flagged as poor quality0
Sequence length150
%GC33

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT2784810.705457676768065No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG164466.322247807818429No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG158686.100050359629261No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG141875.453832521556612No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA99493.824640851269947No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG91843.5305559933725186No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC84783.259152189875023No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC75642.9077880590014953No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT66142.5425846406975No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA61182.35191001387773No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG58762.2588792483729225No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA58352.243117837688224No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC44211.6995413813915405No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG43831.6849332446593805No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT42181.6215031772697392No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT38071.4635046457719054No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC32261.2401539236301988No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT31541.2124753487692645No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACTGTTAATATAGAAGAGACAC26351.012958954980029No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC21430.8238220267636441No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT21080.8103671639840233No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG20920.8042163695704824No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCCTAAATGTCTTTGTCCTTCTA20920.8042163695704824No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC20080.7719246988993922No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA17930.6892733989674353No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA17310.6654390706149641No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT16830.6469866873743412No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG16620.6389137697065687No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT16290.6262277562286405No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT14880.5720238804593105No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT13800.530506018167909No Hit
CATAGACCAGTACGCCTTACCCCTTGTGAATGGTGCTGGAATAGTTGGAC12410.47707099170027184No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT11980.46054073171388044No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG11570.4447793210291817No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT11420.43901295126648704No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT11160.4290179103444829No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT10910.41940729407332517No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGCTGGAATAGTTGG10420.40057048618185587No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAATGATGGGAGTGTCT10340.39749508897508545No Hit
CATAGATGACATGGGAAATTATGCTGCTATAGATGCCTGGCCAACTGTTT10290.39557296572085393No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCCCGTTCTCTCTGTTGTGTCTA10260.394419691768315No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG9920.38134925363954036No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTAACTGGCTTGATTGCACCTTT9900.3805804043378478No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT9550.36712554155822685No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG9350.35943704854130065No Hit
CATAGATCTAGCCCATCACTTCAGCACACTGACGAATGAGGAAACAGGCA8830.3394469666972925No Hit
CATAGAATCTGGTTCAAGCACACAGTACACTGTCATTGTGGGTTTTAACT8650.3325273229820589No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCAACATGCTTTTAGTCACG8480.32599210391767164No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG8360.3213790081075159No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC7360.2829365430228848No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT7330.28178326907034584No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG6780.26063991327379876No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG6660.25602681746364303No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG6320.24295637933486847No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTGGGAGAAGAAATGTTGG6010.23103921515863282No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5980.2298859412060939No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC5960.22911709190440127No Hit
CATAGATCTAGCCCATCACTTCAGCATACGGTGTCAGACCCAGGCTACAC5770.22181302353832139No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGACACTGTCATTGTGGGTTTTAACT5760.22142859888747507No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTGAGACAGTTGTGGAAAGTGCAAT5750.22104417423662875No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGTTACAAAAATTGGG5650.21719992772816563No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGACCCTGGGAGAA5540.2129712565688562No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGTCATTGTGGGTTTTAACTACT5340.20528276355193No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT4890.18798365426384603No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCCTGGGAGAAGAAATGTTG4870.1872148049621534No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG4800.18452383240622922No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT4710.18106401054861243No Hit
CATAGATGGCCCAGAATCCTTTGTAGACCATGGAGAGAATAATCCGTCTA4630.17798861334184193No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTATGGGCTGGTGTTTTCC4580.17606649008761038No Hit
CATAGAGCAGCTTGAATTCTCCTCAGAACACTGACGAATGAGGAAACAGG4540.17452879148422512No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG4410.1695312710232231No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGGCCCTTCAGCATCATTTCTA4330.1664558738164526No Hit
CATAGATCTAGCCCATCACTTCAGCATGGCAAATGATGGGAGTGTCTGCT4170.16030507940291164No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGACAGTTGTGGAAAGTGCAAT4110.15799853149783377No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACGACAGTTGTGGAAAGTGCAAT3980.15300101103683172No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAGTTGTGGAAAGTGCAATGAGTC3910.15031003848090754No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATGTGTATGCTTTATTCTCACGT3680.1414682715114424No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT3680.1414682715114424No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC3620.13916172360636453No Hit
CATAGATGGCAAATGGTGGGATCTCTACCATGTCGTCAGTGTGGTGCTGG3240.12455358687420472No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT3160.12147818966743423No Hit
CATAGACCAGTACGCCTTACCCCTTGACAGTTGTGGAAAGTGCAATGAGT3120.119940491064049No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA3110.11955606641320267No Hit
CATAGAACATTGATTCCTGGCATGTCCGATGCCTGGCCAACTGTTTTTTC3070.11801836780981745No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG3010.11571181990473957No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCAGACCCAGGCTACACA3000.11532739525389325No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGACTGTTAATATAGAA2870.1103298747928912No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG2700.10379465572850394No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG2670.102641381775965No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTACAGTTGTGGAAAGTGCA2640.10148810782342607No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)