FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences157043
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2693917.15390052406029No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA126278.040472991473672No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC90765.779308851715772No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC67504.29818584718835No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC62073.952420674592309No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA59793.807237508198392No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG57953.6900721458454058No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG57073.634036537763542No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA56053.569086173850474No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA48523.0895996637863514No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTACACATAGACCCCCAGTA42352.6967136389396535No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC38462.4490107804868733No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG35112.235693408811599No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC20631.313652948555491No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT20251.2894557541565048No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT17001.0825060652178067No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT16901.0761383824812314No Hit
CATAGAACAAGGCCAGAATTACCCTGACTTGTGCTCATACAGAATTAGAT16181.0302910667778888No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT15961.0162821647574232No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC13120.8354399750386836No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG11050.7036289423915743No Hit
CATAGAATGCAGGAGAATATACACAGGTTACATAGAATTAGCGGAGAGTG10560.6724272969823551No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT9150.5826429703966429No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC8660.5514413249874238No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGAGGAATTCTTGCCAGGGAT8260.5259705940411225No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCATGCTCACACCTTGATCTATGA8010.5100513871996842No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT7820.497952790000191No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT6990.44510102328661577No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT6380.4062581585935063No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG5880.37441974491062957No Hit
CATAGAGAAGAGAAGGCGACAATGGCAGAAAGAAGCCCCAAGGGCAGGTC5320.3387607215858077No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT5310.33812395331215017No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC4950.315200295460479No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG4340.27635743076736946No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGACTTCAGTTGACTATAAGAA4260.27126328457810917No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTACTGGGTGAGAA4150.2642588335678763No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT4140.2636220652942188No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA4040.25725438255764344No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA3810.24260871226352018No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC3600.22923657851671198No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG3530.22477920060110923No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTTTTCTCTTCTTGGCATCT3470.22095859095916404No Hit
CATAGACTTGATGCCCAGGAAACCTCAACTTCAGTTGACTATAAGAAACA3440.21904828613819147No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC3280.2088599937596709No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT3200.20376584757041066No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGGGAGAGGCTGTTTGAGATCTAT3100.19739816483383532No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT3090.19676139656017777No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTATGAGGAATTCT2980.1897569455499449No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2920.1859363359079997No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2770.17638481180313673No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC2640.1681068242455888No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT2520.16046560496169837No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA2450.15600822704609565No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCGTCCGCAGTTGTT2330.14836700776220527No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2320.14773023948854772No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTCGGCAGTGAGGTACAGAAATCTA2310.1470934712148902No Hit
CATAGAATGCAGGAGAATATACACAGGTTCTATGTCCCAGCAGAATCAGG2220.1413625567519724No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTACATGGTGGGTG2190.13945225193099978No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA2100.13372133746808199No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT1980.1260801181841916No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTCTAC1980.1260801181841916No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTTTCTGAGGCCTGAGATTGC1890.12034920372127379No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT1780.11334475271104093No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT1630.10379322860617791No Hit
CATAGAGCTTCTTCCTGTTCATATTGGGCAACAGAACAACAACATCTATG1620.10315646033252038No Hit
CATAGAACAATGTAATAAGCATCGGAGGACATGGATGAAGCTGGATCTAT1620.10315646033252038No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG1590.1012461555115478No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)