FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808327

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808327
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences157043
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2690517.132250402755933No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT129418.240418229402138No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG97586.21358481435021No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA67914.324293346408309No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG62003.9479632966767064No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA60333.841622994975898No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG60243.8358920805129806No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG58413.719363486433652No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT57393.6544131225205834No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT49533.153913259425763No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGTCTATGTGTAGTGCCA42982.7368300401800782No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA39602.521602363683832No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG35912.286634870704202No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC20821.3257515457549842No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT20311.2932763637984501No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT17401.107976796164108No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT17371.1060664913431353No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCAGGGTAATTCTGGC16701.0634030170080806No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT16151.0283807619569163No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA12960.825251682660163No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG11940.7603013187470947No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG11280.7182746126856976No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGTAACCTGTGTATATTCTCC10310.6565080901409168No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT9420.5998357137853964No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA8840.5629031539132594No Hit
CATAGATCCCTGGCAAGAATTCCTCAGAAGCTTTGAGATTTGTGTCTGTT8370.5329750450513554No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT8180.5208764478518623No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT7030.4476480963812459No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT6600.42026706061397195No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC5680.36168437943747894No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG5460.3476754774170132No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG5140.3272988926599721No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC4480.2852721865985749No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCATAGAGGTTTCCTGGGCA4270.2719000528517667No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC4250.27062651630445167No Hit
CATAGAGCCATCATCATTTCTCACCCAGTACGGTAGCAGAAGCTTTGAGA4230.26935297975713657No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA3870.2464293219054654No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC3630.2311468833376846No Hit
CATAGACGGGAAGAGTAAGACCACCCAATTACCTTTCACGTAAGCAGATG3590.22859981024305445No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC3560.22668950542208186No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTGAGGTTTCCTGGGCATCA3480.22159535923282156No Hit
CATAGATGCCAAGAAGAGAAAAGCAGGAAAGTTGGAACCTATCAGTGTCT3460.22032182268550649No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCGTGGTGTGCAAATTCT3320.21140706685430105No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3180.2024923110230956No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA3150.200582006202123No Hit
CATAGATCTCAAACAGCCTCTCCCAGGTAAACAAACTTCTGGCCCTCTAT3090.19676139656017777No Hit
CATAGATCCCTGGCAAGAATTCCTCATACGGTAGCAGAAGCTTTGAGATT3040.19357755519189013No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2670.17001712906656138No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC2590.16492298287730112No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA2400.15282438567780798No Hit
CATAGAGGAAAGAACAACTGCGGACGGTCTCATAGAGGCAAGGGTACTAT2340.1490037760358628No Hit
CATAGATTTCTGTACCTCACTGCCGAGGTAAACAAACTTCTGGCCCTCTA2290.14581993466757512No Hit
CATAGAACAATCAGGCACCCACCATGTACGGTAGCAGAAGCTTTGAGATT2240.14263609329928745No Hit
CATAGAACCAACCCTGATTCTGCTGGGACATAGAACCTGTGTATATTCTC2230.14199932502562992No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA2050.13053749609979434No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT2040.1299007278261368No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT1980.1260801181841916No Hit
CATAGATAGCAGCAATCTCAGGCCTCAGAAACAGGAAAGTTGGAACCTAT1900.12098597199493133No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC1810.11525505753201352No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT1730.11016091134275324No Hit
CATAGATCCAGCTTCATCCATGTCCTCCGATGCTTATTACATTGTTCTAT1610.10251969205886287No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)