FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences176261
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2322813.178184623938364No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT145358.246293848327197No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA85494.85019374677325No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA76794.356607530877506No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG72154.093361549066441No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA47332.685222482568464No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA38912.2075218000578687No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA31461.7848531439172592No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA30061.7054254769915071No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT27241.5454354621839206No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA25871.4677098166922915No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG25281.4342367284878674No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG20451.1602112775940225No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG19691.1170934012629No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA19111.084187653536517No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT18631.0569553105905447No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC18541.051849246288175No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA17781.0087313699570524No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATAGAACAGCTAAAAATCT16650.9446218959384096No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA15380.8725696552271915No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT13780.7817951787406177No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTAATGAGGGTAATGGAGG12830.7278978333267143No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAGACATGTGTGAGAGGGAA12810.7267631523706322No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT11460.6501721878350855No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACAGGTGCAAATTGTCAGTGT10830.614429737718497No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT10740.6093236734161271No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA10690.6064869710259219No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC10540.5979768638553055No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC10370.588332075728607No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA8910.5055003659346083No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT8690.4930188754177044No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG8620.4890474920714168No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCCCTCATTATCCCTGTGCCTC8480.48110472537884164No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT8390.4759986610764718No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC8220.4663538729497733No Hit
CATAGAATACAACACACTCTCTGCCCTGATGCACATCTACAAGGACACTC7990.45330504195482835No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC7570.4294767418771027No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG7560.42890940139906164No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT7550.4283420609210205No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT7550.4283420609210205No Hit
CATAGATGCTTCTGATATGTTGCCGTGACATAGACATGTGTGAGAGGGAA7370.41812993231628093No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7250.41132184657978793No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA7040.39940769654092506No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT6950.3943016322385553No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG6710.38068546076556925No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG6490.3682039702486653No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT5760.326788115351666No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA5580.31657598674692644No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA5400.30636385814218686No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA5330.30239247479589926No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG5190.29444970810332405No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG5170.29331502714724184No Hit
CATAGATGCCTCAAAGAGCTGAAGACACAGAGGGTAATGGAGGAGTATGG5120.29047832475703644No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACAGGTGCAAATTGTCAGTGTGT4950.28083353663033794No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT4470.2536011936843658No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG4260.24168704364550297No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACATGTGTGAGAGGGAAGGACT4230.2399850222113797No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG4190.23771566029921537No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCAGCAAACTAACACAGAAAC4160.2360136388650921No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACAGGCCACTCTCAGTT3900.22126278643602384No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACACGGACTACAAGT3820.21672406261169516No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATAGACCACACGCACAACTGGC3690.209348636397161No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA3660.2076466149630378No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT3660.2076466149630378No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT3510.19913650779242145No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC3440.19516512444613385No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAGCAAACTAA3260.1849529958413943No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC3210.18211629345118885No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3180.1804142720170656No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA3160.17927959106098343No Hit
CATAGACCCTCCTATCCCTTTTCCCCGACATGTGTGAGAGGGAAGGACTC3090.17530820771469582No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG3060.17360618628057256No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA3000.17020214341232603No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2990.16963480293428496No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGCTGAGAAAGGAGGATCA2650.150345226680888No Hit
CATAGACCCTCCTATCCCTTTTCCCCACACTGACGACATGTGTGAGAGGG2580.14637384333460038No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA2560.14523916237851822No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG2530.14353714094439496No Hit
CATAGACCCTCCTATCCCTTTTCCCCACACGGACTACAAGTACCCACCAC2530.14353714094439496No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGAGAGGAGGGGGCAGAATATCTAT2430.1378637361639841No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC2400.13616171472986083No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA2380.13502703377377864No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG2220.12594958612512128No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAATCCTTCTATGAG2200.12481490516903909No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG2190.124247564690998No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2090.11857415991058715No Hit
CATAGAATACAACACACTCTCTGCCCTGTGATATGTCTGCTGAGATTGGC2090.11857415991058715No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG1910.10836203130584758No Hit
CATAGAGAATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA1860.10552532891564213No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA1810.10268862652543671No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)