FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences176261
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2301713.058475783071694No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT141518.028435104759419No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT82674.690203731965665No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA77484.39575402386234No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG72834.131940701573235No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA46172.619410987115698No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT39862.261419145471772No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA31701.7984693153902453No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA29731.6867032412161511No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT25781.4626037523899218No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT25721.459199709521675No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG23651.3417602305671703No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG20361.1551052132916528No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA19221.0904283987949688No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG19201.0892937178388866No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT19091.0830529725804348No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT18571.053551267722298No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT17280.9803643460549979No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTCTGTTTACTCGGAGATTT16530.9378138102019165No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA15960.9054754029535745No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT14020.7954113502136037No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTCTATGCCCCAGGTAGCAAAAC12970.7358406000192895No Hit
CATAGATCCCATACTCCTCCATTACCCTCATTACTTTTCTAATCAATAGT12650.7176857047219748No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT11590.6575476140496196No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC10630.6030829281576753No Hit
CATAGACACACTGACAATTTGCACCTGTACGATAGCGAGAAGAGTGGAGG10290.5837933519042783No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA10240.5809566495140729No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC10070.5713118613873744No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC9930.5633690946947991No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA9200.5219532397977998No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT8790.4986922801981153No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8620.4890474920714168No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG8390.4759986610764718No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAATCTTTGGGAGGCTATTAGTC8350.47372929916430745No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA8300.470892596774102No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATCAGGGCAGAGAGTGTGTTGTA7660.43458280617947254No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT7630.43288078474534925No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTCACGGCAACATATCAGA7520.42664003948689727No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG7510.4260726990088562No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG7410.4203992942284453No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT7310.41472588944803446No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT6780.38465684411185685No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6750.3829548226777336No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT6650.3772814178973227No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA6470.36706928929258315No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC5710.32395141296146057No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA5630.31941268913713183No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG5270.29898843192765273No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT5230.2967190700154884No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA5220.2961517295374473No Hit
CATAGATCCCATACTCCTCCATTACCCTCTGTGTCTTCAGCTCTTTGAGG5120.29047832475703644No Hit
CATAGACACACTGACAATTTGCACCTGTACGGAAGACACAGCACACTCTT5120.29047832475703644No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC5020.28480491997662555No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTCCTTCCACTACCCACCTGCCT4250.2411197031674619No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT4240.24055236268942082No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT4230.2399850222113797No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC4130.23431161743096884No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGAGAATGATATTGT3990.22636885073839363No Hit
CATAGACCACACACACAACTGAGAGTGGCCTGTGTGAGGAGAATGATATT3890.22069544595798274No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCCCCAGGTAG3760.21332001974344864No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC3720.21105065783128427No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA3640.2065119340069556No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT3630.20594459352891453No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGTCTATGACCCCAGGTAGC3610.20480991257283235No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTGCATTCTCTCAGG3300.18722235775355867No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT3170.1798469315390245No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3060.17360618628057256No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA3030.1719041648464493No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3010.1707694838903671No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA3010.1707694838903671No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGTAGCAGAGACCTT2990.16963480293428496No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGGGGAAAAGGGATAGGAGGGTC2970.1685001219782028No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2600.14750852429068256No Hit
CATAGATATTCTGCCCCCTCCTCTCCCTTCCACTACCCACCTGCCTCTAT2580.14637384333460038No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGGGGAAAAGGGATA2560.14523916237851822No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGGAAAAGGGATAGGAGG2510.14240245998831277No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCTACGATAGCGAGAAGAGTGGAGG2500.1418351195102717No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG2460.13956575759810735No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA2440.1384310766420252No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT2390.13559437425181975No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2340.13275767186161433No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA2270.1287862885153267No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2160.12254554325687474No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG2070.11743947895450496No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2020.11460277656429954No Hit
CATAGACACAGGCCAATCTCAGCAGACATATCACAGGGCAGAGAGTGTGT1970.1117660741740941No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)