FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences201544
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA193769.613781606001668No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG136276.7613027428253885No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG99544.9388719088635735No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT75153.728714325407852No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC73143.628984241654428No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG61523.052435200254039No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG54352.696681617909737No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT51052.5329456595085937No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG35061.739570515619418No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA28001.3892747985551541No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA27621.3704203548604772No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT27211.3500774024530624No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG25411.2607668796888025No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT22661.1243202476878498No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA20421.0131782638034375No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT18970.9412336760211171No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG17880.8871511927916486No Hit
CATAGACCAAACACAGAAGACATGGCAAAGCTGCTATGGGATCTTCTATG17020.8444806096931687No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC16290.8082602310165523No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA15960.7918866351764378No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA14860.7373079823760569No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC14780.7333386258087564No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC14050.6971182471321399No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACACTGATGAATGTTGGA12250.60780772436788No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC12150.6028460286587544No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT12000.5954034850950661No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT11700.5805183979676894No Hit
CATAGATGATGTGAAAAGGACCCATGGGGAAGTAGGGAATGATTACAAGT10110.5016274361925932No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG10110.5016274361925932No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG9930.4926963839161672No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG9840.4882308577779542No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTTCAGAACGCGGCAAATGG9050.4490334616758624No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA8950.4440717659667368No Hit
CATAGACTGGCGGTGATTGCTTTCCTTGGCCTCAGTTTCCCCTCCTTCTA8310.4123169134283333No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT8300.4118207438574207No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA7840.3889969435954432No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCCGGATTCAAGCAATTCTTCTAT7630.3785773826062795No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT7070.3507918866351764No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGATGTGGCATGGAGAAGG7000.34731869963878853No Hit
CATAGATTAGGGGTGACGGACTAGCCTACGGTAGCAAAGCTGCTATGGGA6990.346822530067876No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA6960.3453340213551383No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC6890.3418608343587504No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG6480.3215178819513357No Hit
CATAGACCTGACCTCATGATCTGCCTTTTGCTCATCCATTGTTGATCTAT6410.3180446949549478No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA6180.30663279482395905No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG6150.30514428611122135No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA6080.3016710991148335No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG6000.29770174254753307No Hit
CATAGACTGGCGGTGATTGCTTTCCTATGATGTGGCATGGAGAAGGGTCT5970.2962132338347954No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA5970.2962132338347954No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC5950.29522089469297025No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGACTTGGCCTCAGTTTCCCCTCCT5910.29323621640932No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGACTTGGCCTCAGTT5900.29274004683840754No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAAACCATG5640.27983963799468103No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA5410.26842773786369234No Hit
CATAGACCTGACCTCATGATCTGCCTTCAGAACGCGGCAAATGGTCTATG5280.26197753344182906No Hit
CATAGAGCCAAAGAGATGCTGAAAGGGACTTGGCCTCAGTTTCCCCTCCT5180.25701583773270353No Hit
CATAGATGATGTGAAAAGGACCCATGGGCCATGCTGAAGTCCCATGATCT5070.2515579724526654No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG5010.24858095502719008No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG5010.24858095502719008No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT4990.247588615885365No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATATTTGAGGTAAAA4730.23468820704163856No Hit
CATAGACCTGACCTCATGATCTGCCTTTCTGGGTAGCTGCGACCTCTATG4720.234192037470726No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCATAGATTTATCCAGCATGCCCCTC4680.23220735918707577No Hit
CATAGATGATGTGAAAAGGACCCATGGTACGGTAGCAGACACTGGGGGCA4340.21533759377604889No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGACACTGGGGGCACAAAG4260.21136823720874845No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGGGAAGTAGGG4220.20938355892509822No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAAGGTGGGAGGATTGCTTGAGT4010.19896399793593458No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGATCTATGTGTAGAACCATGTC3940.1954908109395467No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGATGTTTTAAAATGAGCAC3860.19152145437224627No Hit
CATAGACCTGACCTCATGATCTGCCTCCCGGATTCAAGCAATTCTTCTAT3680.18259040209582028No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATTACAAGGGAAGTAGGGAAT3640.18060572381217005No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA3640.18060572381217005No Hit
CATAGACCTGACCTCATGATCTGCCTGCTTCGGCCTCCCAAAGTACTTGG3620.17961338467034493No Hit
CATAGATGTGAGCACTACTGATAATCCCTCTTGGCCTCAGTTTCCCCTCC3560.1766363672448696No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT3460.17167467153574406No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACACTGATGTGGCATGGAGAAGGG3430.1701861628230064No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAGGGAAGTAGGGAATGATTACA3420.16968999325209383No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG3210.1592704322629302No Hit
CATAGAGGCTGGGTGACTTGGTGAATCTATGTGTAGAACCATGTCGTCAT3110.15430873655380462No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTTACGGTAGCAGAGACTCA2930.14537768427737865No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG2920.14488151470646607No Hit
CATAGACTTTTCCTCCAATATAGCTGCACACTACAATTACAGTACTAGAT2760.1369428015718652No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT2750.13644663200095264No Hit
CATAGACCAGCTTTGCATGAGTGTGGTGGTATGCGCCTATAGTCCCAGCT2690.13346961457547732No Hit
CATAGATGATGTGAAAAGGACCCATGGATGATGTGGCATGGAGAAGGGTC2680.13297344500456476No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAAGCTGCTATGGGATC2670.1324772754336522No Hit
CATAGATTAGGGGTGACGGACTAGCCGCAGAGACTTGGCCTCAGTTTCCC2580.1280117492954392No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT2580.1280117492954392No Hit
CATAGATGTGAGCACTACTGATAATCCCTCATTACTCTGGTTCTATGTGT2320.11511134045171277No Hit
CATAGATTAGGGGTGACGGACTAGCCTCAGTTTCCCCTCCTTCTATGTGT2320.11511134045171277No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTATTCAGCGAATTCCTGAT2300.11411900130988767No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAAGCTGCTATGGGATCTT2230.11064581431349978No Hit
CATAGACCTGACCTCATGATCTGCCTCGGCCTCCCAAAGTGCTGGGATTA2150.10667645774619934No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA2130.10568411860437422No Hit
CATAGATGACCTGTTAATCTGCCCCCACAAACACATCCCTGTCCCAGTTG2100.10419560989163656No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTTACGGTAGCAAAGCTGCT2050.1017147620370738No Hit
CATAGATCCACTGTGCTATCTCTGACACCGTAAGGTGGGAGGATTGCTTG2020.10022625332433613No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)