FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90540
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4054644.78241661144246No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG55046.079081069140711No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT37704.163905456151977No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC17231.9030262867240997No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT12801.4137397835210956No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT12561.3872321625800752No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG12061.3320079522862822No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA11781.3010823945217584No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG11421.2613209631102276No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTACAGACAGGATGCGC9241.020543406229291No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT7380.8151093439363818No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC7380.8151093439363818No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA6970.7698254914954716No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG6270.6925115970841617No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT5910.6527501656726309No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT5050.5577645239673074No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4490.4959134084382593No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG4390.48486856637950076No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT4150.4583609454384802No Hit
CATAGAGGTGTCCTTTCCCCACTTTATTTGGAGGATGATCAATGCTGCTT4120.4550474928208526No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG3820.42191296664457695No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGATGAGGGT3800.41970399823282534No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT3500.3865694720565496No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG3410.3766291142036669No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT2630.29047934614535015No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2580.28495692511597087No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT2430.268389662027833No Hit
CATAGATCCACAAAGACCAAGAGTGTCGTCAGTGTGGTCTGTTCGGCCAC2420.26728517782195715No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAATTAGC2320.25624033576319855No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC2130.23525513585155733No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT2070.22862823061630216No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT2010.22200132538104703No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1990.21979235696929533No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1950.21537442014579194No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1930.2131654517340402No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1850.20432957808703336No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1840.2032250938811575No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1700.1877623149988955No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1680.1855533465871438No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA1670.18444886238126795No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG1650.18223989396951623No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1640.18113540976364037No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1550.17119505191075768No Hit
CATAGAGGGTGCTCCTGTACTGGCTGTGCTGGGTAGTGGTAGTCTATGAG1440.15904572564612326No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1440.15904572564612326No Hit
CATAGAAAGTCTGGACCAAGTGCCTCATGCCTGATGCCAGTGCCTCATGC1400.15462778882261982No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT1390.153523304616744No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1330.14689639938148885No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1300.14358294676386127No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1290.14247846255798544No Hit
CATAGACACATGTAGGATGGGGTGGAGACAGCCGCTCACCTCTATGAGAC1260.13916500994035785No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1250.138060525734482No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1220.13474707311685444No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1180.13032913629335102No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1160.12812016788159927No Hit
CATAGAGGGTGCTCCTGTACTGGGTGCTCCTGTGCTGGGTAGTGGTAGTC1140.12591119946984758No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1120.12370223105809587No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGTTGGTGAGGCGTCGGCTCTCAG1100.12149326264634416No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1090.1203887784404683No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACGACATGGTTATGTAGACA1080.11928429423459246No Hit
CATAGAGATAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT1060.11707532582284072No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT1040.11486635741108903No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1030.11376187320521315No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1020.11265738899933732No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1000.11044842058758561No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGACGCAGGTCAAGGT970.10713496796995803No Hit
CATAGACACATGTAGGATGGGGTGGCAAGTATCTTGGGCTCTCGGAATGA950.10492599955820633No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTACAGATTTGGACCTGCG950.10492599955820633No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACGCCTGTAATCCCAGC930.1027170311464546No Hit
CATAGAGCTATCTGGCAAAAACCCATCTATACAAAAAGTACAAATATTAG910.10050806273470289No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA910.10050806273470289No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)