FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90540
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4146645.79854208084824No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG55696.150872542522642No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA37674.16059200353435No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG26852.9655400927766733No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT13221.4601281201678817No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT12511.3817097415506958No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT12141.340843825933289No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG11121.228186436933952No Hit
CATAGACCATCTGCGCATCCTGTCTGTACGGTAGCAGAGGCACTTGGTCC9251.0216478904351667No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC7400.8173183123481335No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA7360.81290037552463No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT7260.8018555334658715No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG6550.7234371548486856No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG6510.7190192180251823No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA6420.7090788601722995No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT4350.4804506295559973No Hit
CATAGAAGCAGCATTGATCATCCTCCAAATAAAGTGGGGAAAGGACACCT4210.4649878506737354No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC4160.4594654296443561No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTACTCCTATGTAATGT3900.4307488402915839No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC3770.4163905456151977No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT3420.37773359840954274No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT2840.31367351446874314No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG2740.30262867240998453No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG2590.2860614093218467No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2580.28495692511597087No Hit
CATAGACATGAGTGGCCGAACAGACCACACTGACGACACTCTTGGTCTTT2550.28164347249834326No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC2100.23194168323392977No Hit
CATAGACCATCCTCCCACCTTGACCTCATCCTCCCATCTCAAGTCTCACT2030.22421029379279875No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1900.20985199911641267No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG1790.19770267285177823No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1750.1932847360282748No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1750.1932847360282748No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1680.1855533465871438No Hit
CATAGACCATCCTCCCACCTTGACCTCCCGAGTAGCTGGGACTACAGGTG1670.18444886238126795No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1660.1833443781753921No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1610.17782195714601282No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1570.1734040203225094No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1560.17229953611663354No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1550.17119505191075768No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1550.17119505191075768No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1540.17009056770488182No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1470.16235917826375085No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG1440.15904572564612326No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG1410.15573227302849568No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1360.1502098519991164No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAAGGCTGAGGCATGAGGCA1330.14689639938148885No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCATCCTACATGTGTCTATGTGTA1300.14358294676386127No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGACCACAGGTG1210.13364258891097858No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1190.13143362049922686No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1190.13143362049922686No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1180.13032913629335102No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1180.13032913629335102No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTGGGATTACAGGCG1160.12812016788159927No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCAGTACAGGAGCACCCTC1150.12701568367572344No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1130.12480671526397173No Hit
CATAGACCATCCTCCCACCTTGACCTCTCGAGTAGCTAGGACCATAGGTA1080.11928429423459246No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1050.11597084161696489No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1040.11486635741108903No Hit
CATAGACATGAGTGGCCGAACAGACCAGGAGCTAAGGCATCCTTCTATAA1040.11486635741108903No Hit
CATAGACCATCCTCCCACCTTGACCTGCGTCATGAGCCACCATGCCCGGC1040.11486635741108903No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTAGCATTTTAACACA1030.11376187320521315No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTCCTGGAATTATAGGTG990.10934393638170974No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA980.10823945217583388No Hit
CATAGACTACCACTACCCAGCACAGCTTCCTCCTTTCCAAAATGAGGACA970.10713496796995803No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA940.10382151535233046No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA940.10382151535233046No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA930.1027170311464546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)