FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110961
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3325029.96548336803021No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG47924.318634475175963No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG34143.076756698299403No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA28052.5279152134533756No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA26122.3539802272870647No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC25672.3134254377664223No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG21061.8979641495660635No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA21021.894359279386451No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT20621.8583105775903248No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG19421.7501644722019447No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC17091.5401807842395077No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA12211.1003866223267635No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG10630.9579942502320635No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC8860.7984787447842034No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA8080.7281837762817567No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC6130.5524463550256397No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC6100.5497427023909301No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA5400.4866574742477086No Hit
CATAGAAGATGGTCTGCTACACTGGTGACTTCAGCATGTTGAGATGAATA5380.48485503915790235No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC5360.483052604068096No Hit
CATAGAACACAGATCTGCTTGGAGGTAAAGTCTATAGTGCAGCTATATTG4970.4479051198168726No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT4750.42807833382900295No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC4630.41726372329016503No Hit
CATAGACACCTGGATCCTGTGTTGTCTAGGCTGCTCTCAAATTCCTGAGC4470.4028442425717144No Hit
CATAGAAGGAGGGGAAACTGAGGCCATACGGGGGCAGATTAACAGGTCAT4450.40104180748190804No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT4360.3929308495777796No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT4330.39022719694307006No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG4160.3749064986797163No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACAGTGCAGCTATA4060.36589432323068466No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA3680.3316480565243644No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA3590.32353709862023594No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA3550.31993222844062325No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG3410.307315182811979No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA3170.28568596173430305No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG3090.2784762213750777No Hit
CATAGATCACCCAGGTAATCACTAGGTACACTGACGACATGGTTCTACAC3090.2784762213750777No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGAGCAGAGTTGGGTGTGTC2810.2532421301177891No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG2510.22620560377069418No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGGGTCCTTTTCACATCATCTATG2390.21539099323185626No Hit
CATAGATCACCCAGGTAATCACTAGGTACACTGACGGAGTGAGGGCAGTA2330.20998368796243724No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC2330.20998368796243724No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC2300.20728003532772776No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA2250.20277394760321193No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT2240.20187273005830875No Hit
CATAGATCACCTACACAGACAGCTTTCCGTATTCTTATAGCCAGTGTCTC2170.19556420724398663No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA2160.19466298969908347No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2150.1937617721541803No Hit
CNTAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG2020.18204594407043917No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA1960.17663863880102018No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1880.16942889844179487No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG1860.16762646335198855No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT1750.15771307035805374No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT1740.15681185281315055No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGAGGAGGGAAGGAAGGG1740.15681185281315055No Hit
CATAGAACACAGATCTGCTTGGAGGTACCCTGAAGTTTGAGAGCAAGTTC1710.15410820017844107No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1700.1532069826335379No Hit
CNTAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG1690.15230576508863475No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAAGGAGAAG1670.15050332999882843No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT1590.1432935896396031No Hit
CATAGATGTGCCTCTCCAACATTCATGTTCTGGAGACAGCCGCTCACCTC1560.1405899370048936No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1550.13968871945999045No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC1550.13968871945999045No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAGCTATATTGGAGGAAAAGT1490.13428141419057146No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1470.13247897910076514No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTGTTCTACACATAGATTAAGTG1460.13157776155586196No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1430.12887410892115247No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATAGTTTTTCCAAATATAAG1380.12436802119663666No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1360.12256558610683033No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCACCTGGGGTAGTTTTTCCAAATAT1320.11896071592721767No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA1310.1180594983823145No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCTCTCTCCAGAACCCACCAT1310.1180594983823145No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC1310.1180594983823145No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1310.1180594983823145No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGTGCAGAAAGGGATTCATCCAAGT1300.11715828083741135No Hit
CNTAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA1280.11535584574760502No Hit
CNTAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC1250.11265219311289554No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGTCTTCTGTGTTTGGTCTATGAG1240.11175097556799236No Hit
CNTAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA1230.11084975802308919No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1190.10724488784347654No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA1190.10724488784347654No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGCCCTGCG1170.1054424527536702No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGAGAATGAGCCACGCTGCCCC1150.10364001766386388No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1130.10183758257405755No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1130.10183758257405755No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)