FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences167675
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC97485.81362755330252No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA87485.217235723870583No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC69084.119874757715819No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA68844.105561353809453No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT53063.1644550469658563No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA50313.000447293872074No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA49582.9569106903235425No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA43052.567466825704488No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA37532.238258535858059No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG27731.6537945430147607No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT27241.6245713433725957No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG22641.3502311018339048No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT21671.292381094379007No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC20701.2345310869241093No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA19931.1886089160578501No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA19401.1570001490979573No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA19331.1528254062919339No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT18371.095571790666468No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA18131.0812583867601013No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT17541.0460712688236171No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC16680.9947815714924705No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC13620.8122856716862978No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT13430.8009542269270911No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGCACATTATTATTGGTTGGTTC13370.7973758759504994No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC13300.7932011331444759No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT12860.7669598926494707No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC12670.7556284478902638No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG12590.7508573132548084No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG12550.7484717459370807No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG12290.7329655583718503No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11310.6745191590875205No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA10630.6339645146861488No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC10500.6262114209035335No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA10390.6196511107797823No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG10300.6142835843148949No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG10000.5963918294319368No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA9860.5880423438198896No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT9690.5779036827195467No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA9160.546294915759654No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG8930.5325779036827195No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA8630.5146861487997615No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT8330.4967943939168033No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTACAATGGGCACACTTAAC8090.48248099001043687No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC7960.4747278962278217No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT7310.4359624273147458No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT7160.42701654987326676No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG7130.42522737438497094No Hit
CATAGATTGCCTCATTGTGCCAGACAATGGGCACACTTAACACCTCTATG6900.41151036230803634No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA6750.4025644848665574No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC6690.39898613388996573No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT6420.3828835544953034No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT6230.37155210973609665No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA6180.36857015058893694No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA6150.3667809751006411No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT6110.3643954077829134No Hit
CATAGATCTGGGAGGTGAAGAGGACAGAATCAGGATGACTTATGGAATCT5760.3435216937527956No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG5750.3429253019233637No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5690.33934695094677203No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5680.3387505591173401No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTGGTGAAAAGTAGGGGACAGTTCT5570.3321902489935888No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA5490.3274191143581333No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG5410.3226479797226778No Hit
CATAGATGCACCAGAAGCCACCTACCCCCTTTACCTACCTTCTCAGCTCT5360.31966602057551813No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACCCGTAATCCCTCCCTTTTC5030.2999850902042642No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5010.29879230654540034No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT4960.29581034739824064No Hit
CATAGAATTCCCCAATGTCCTGTGCATCGGCCGCACTGAAATTGTCTATG4790.28567168629789774No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT4550.2713582823915312No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCCCTTTACCTACCTTCTCAG4550.2713582823915312No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCATGAGGTTCTTCAACACAGCT4470.2665871477560757No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4460.26599075592664384No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC4290.2558520948263009No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGGCAAGTGTATGGTCAGTTCT4280.25525570299686895No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG4240.2528701356791412No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC4230.25227374384970924No Hit
CATAGATTTGGCACTCACATACACGCATGGTTCCAACTCTATAGATTATG4120.24571343372595794No Hit
CATAGATGTCCCCATTCATCCTGCAACATGTCCCCTTCATTTTGCTGGAA4080.24332786640823023No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT3920.23378559713731922No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT3810.2272252870135679No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG3800.22662889518413595No Hit
CATAGACCCACTTACACACACAGGTTTACACTGACGACAATGGGCACACT3790.226032503354704No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3750.22364693603697627No Hit
CATAGATGCACCAGAAGCCACCTACCCCCTTTGCCAAGATTGTAGGAGTA3740.2230505442075444No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT3720.2218577605486805No Hit
CATAGACAGTCCTGCCGTGTACATGTGAGTGCCACAAGCACATTATTATT3630.21649023408379306No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA3570.21291188310720144No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3530.21052631578947367No Hit
CATAGAATCCCTGCCCTTGACCTTGGACACTGACGACAAGGTTTTCCGGC3520.20992992396004173No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3500.20873714030117788No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA3420.20396600566572237No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT3410.20336961383629043No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3400.2027732220068585No Hit
CATAGATGCACCAGAAGCCACCTACCGTATTTGGGGGAAGAGAAACAGAA3250.19382734456537945No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG3150.1878634262710601No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG3120.1860742507827643No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTACACTGATCTAGCTTCGGAA3100.1848814671239004No Hit
CATAGATCATGAATGACTCCCACTCTGGGCCCATAATACACTTTTCTATG3040.1813031161473088No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG3020.1801103324884449No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAAGGATGACTTATGGA3010.17951394065901297No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2990.17832115700014908No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCCCTTTACCTACCTTCTC2960.1765319815118533No Hit
CATAGAATTGCCTACTTTGGGACCCATACAAGCACATTATTATTGGTTGG2760.16460414492321457No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATCACTTGATCATCCATTGT2720.1622185776054868No Hit
CATAGATGCACCAGAAGCCACCTACCTTCCAACTCTATAGATTATGCTCT2670.15923661845832712No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT2630.15685105114059936No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC2610.1556582674817355No Hit
CATAGATTTGGCACTCACATACACGCTTTGGGGGAAGAGAAACAGAATCT2540.15148352467571194No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAATTTTGGGGGAAGAGAAACA2520.15029074101684808No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2450.1461159982108245No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCATAGAACAAGGGCATGGTCAAGTG2340.13955568808707322No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2300.13717012076934545No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC2240.13359176979275383No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGAGGGCAAGTGTATGGTCAGTT2210.13180259430445804No Hit
CATAGACAGAACACCACACCCCTGTCTATGACTTAGGAGTTCTGGCCCCT2200.1312062024750261No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2170.1294170269867303No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2160.12882063515729836No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTGGGAGGAACAGGGAGATGT2140.12762785149843447No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA2130.12703145966900253No Hit
CATAGACAGAACACCACACCCCTGTCTATGCCAAGTATATGACACATTAC2120.1264350678395706No Hit
CATAGACAGAACACCACACCCCTGTCAGAACACCACAGCCCAGTTTTCCT2100.1252422841807067No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTACACCCGTAATCCCTCCCTTT2090.12464589235127478No Hit
CATAGACAGAACACCACACCCCTGTCTAGGAATTAGAGCCAGTTCTGAGT2060.12285671686297897No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG2040.12166393320411512No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTACCGTAAGAACAAGGGCAT1910.11391083942149992No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1910.11391083942149992No Hit
CATAGACCATGTAATACCATCGTGAGCAGACAATGGGCACACTTAACACC1910.11391083942149992No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT1800.10735052929774862No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT1790.10675413746831669No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG1760.10496496198002087No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTAGGAGTTCTGGCCCCTGTCT1730.10317578649172506No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCTTAGGAGTTCTGGCC1680.10019382734456539No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)