FastQCFastQC Report
Tue 7 May 2024
EGAF00005808377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15837
Total Bases2.3 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT15309.66092062890699No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG14479.136831470606808No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA8765.531350634589884No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG8285.228262928584959No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG7304.609458862158236No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT5553.5044516006819473No Hit
CATAGACTCACTCTGTCACCCAAGCTGAGACTTGGTCTCATAGAGAAGCT4182.6393887731262233No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG3862.437330302456273No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT2881.8185262360295509No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT2861.8058975816126792No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATGATCTATGTGTAGA2501.5785818021089852No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA2181.3765233314390353No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG2021.27549409610406No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT1951.2312938056450085No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1751.1050072614762896No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT1570.9913493717244428No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG1560.9850350445160068No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG1550.9787207173075709No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA1370.865062827555724No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA1170.7387762833870051No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT1070.6756330113026456No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGTATGCAGTCTGTGA870.5493464671339269No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC840.530403485508619No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT820.5177748310917472No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCTAGTGCCATACCAAGAATAAGA810.5114605038833112No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAGGCAAGGGT810.5114605038833112No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT770.48620319504956744No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC760.47988886784113155No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG750.4735745406326956No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCATAGAGGCAAGGGTACTA740.46726021342425966No Hit
CATAGACTCACTCTGTCACCCAAGCTATAGAGAAGCTTTGAGATTTGTGT720.4546315590073877No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC700.4420029045905159No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGCAGGAAAGTTGGAACCT670.423059922965208No Hit
CATAGATCTCAAACAGCCTCTCCCAGCATAGAGCCATTGTCGCCTTCTCT660.4167455957567721No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA630.39780261413146434No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCTCATAGAGGTTTCCTGGG620.3914882869230284No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA520.32834501483866896No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGTATGCAGTCTGTGAGCT520.32834501483866896No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG500.31571636042179707No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT500.31571636042179707No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC490.3094020332133611No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG450.28414472437961735No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT450.28414472437961735No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCTGC450.28414472437961735No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCTGAGGTTTCCTGGG430.27151606996274547No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT390.2462587611290017No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTACACATTTATCGGGAGCCACAG360.22731577950369386No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTTGTGACACCGAAAA330.20837279787838606No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGCTGCTGCTCA310.1957441434615142No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC310.1957441434615142No Hit
CATAGATCCAGCTTCATCCATGTCCCATGATCTATGTGTAGAACCATGTC290.1831154890446423No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACGTGGTGTTTGGG290.1831154890446423No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT280.17680116183620634No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT280.17680116183620634No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC270.17048683462777042No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCCTGCTGCTCACTCTTT260.16417250741933448No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT250.15785818021089854No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTACTGCTGCTCACTCT250.15785818021089854No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCTGT250.15785818021089854No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC240.1515438530024626No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGCTGCTGCTCACT240.1515438530024626No Hit
CATAGAGCCATCATCATTTCTCACCCAGGTAAACAAACTTCTGGCCCTCT230.14522952579402665No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC230.14522952579402665No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA220.1389151985855907No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCACT220.1389151985855907No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTACGGTAGTAGAGACTTGG210.13260087137715476No Hit
CATAGAACTAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG210.13260087137715476No Hit
CATAGAGCTATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT200.12628654416871882No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA190.11997221696028289No Hit
CATAGACTCACTCTGTCACCCAAGCTGCTGCTCACTCTTTGGGTTCTATG180.11365788975184693No Hit
CATAGATCCAGCTTCATCCATGTCCCTTTCAGAGGCAAGGGTACTATTTT170.10734356254341101No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA170.10734356254341101No Hit
CATAGACTCACTCTGTCACCCAAGCTTACGGTAGCAGAGGCAAGGGTACT170.10734356254341101No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGC170.10734356254341101No Hit
CATAGATGTTGTTGTTCTGTTGCCCAAGCTGAGACTTGGTCTCATAGAGA160.10102923533497506No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTCTGCTGCTCACTCTTTGG160.10102923533497506No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)