FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808378

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808378
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30440
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA15705.157687253613666No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA15235.003285151116951No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT14614.799605781865965No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC7232.3751642575558476No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACTGATACAGGAAGGCC6472.1254927726675428No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG6332.0795006570302235No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA6031.9809461235216819No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA5841.9185282522996057No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGGTTCTA5751.8889618922470435No Hit
CATAGATGCCCTTTTTGTGTACTTCCACCTGATTGGCCATTTGAACTCTA5351.757555847568988No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA5341.7542706964520367No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG5291.7378449408672798No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT4961.6294349540078843No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT4251.3961892247043364No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG4071.3370565045992115No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT3841.2614980289093298No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCTCAGTGTTGACTGATACAG3321.090670170827858No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA3040.9986859395532195No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTTCTTTCAAAAGTCTGGTCT3030.9954007884362681No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC2950.9691195795006571No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACTGATACAGGAAGGCCTTT2900.9526938239159002No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2800.9198423127463863No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGATCTATCCAGGAATTTTATT2790.916557161629435No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTCACAAGCAATGGGGAAAGGATT2640.8672798948751642No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACATGGTTCTACACATAGATGCC2610.8574244415243102No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACCTACACAAAGTCACGAA2530.8311432325886992No Hit
CATAGATGCCCTTTTTGTGTACTTCCATACGGTTGCACAGATCATTTAAG2430.7982917214191853No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCGAATAAATGGGGGCAAGGA2410.7917214191852826No Hit
CATAGATGTCCATCATGTGGAAGCTGCTTCCTTCTGCTGGCTATTCTATG2360.7752956636005256No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACACATGGTTCTACACATAG2320.7621550591327201No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACAAGCAATGGGGAAAGGA2250.7391590013140605No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTGCTGGCTTGACTTTTCATC2190.7194480946123522No Hit
CATAGAACTTCACAAGGGCTTTAGGGACACTGACTGATACAGGAAGGCCT2150.7063074901445466No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACAAGCAATGGGGAAAGGATTC2150.7063074901445466No Hit
CATAGATGAAAGCCTGTTGAATTTATGACTGATACAGGAAGGCCTTTCTA2120.6964520367936925No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT2090.6865965834428384No Hit
CATAGATGCCCTTTTTGTGTACTTCCAAATCCTTTCCCTCACTCTCTCCA2070.6800262812089356No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG2060.6767411300919842No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT2020.6636005256241787No Hit
CATAGAAACCCCAAAGGCTATGTTCAGTGTTGTGCTTCTTTCAAAAGTCT2010.6603153745072273No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG2010.6603153745072273No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAACAAGCAATGGGGAAAG2000.657030223390276No Hit
CATAGATTGGAACTTTGCCAGCCTTATCCCCAGAAATGTTAGCATGTCTA1940.6373193166885677No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA1920.6307490144546649No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTACCTGATTGGCCAT1900.6241787122207622No Hit
CATAGAAACCCCAAAGGCTATGTTCAATGGGCAAGCAATGACAGTCTATG1830.6011826544021025No Hit
CATAGACAGGGAGGCGTATAAGTGATGGACCACCTGATTGGCCATTTGAA1810.5946123521681997No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCCTTCCTAACCATGGGCATA1790.588042049934297No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCTTTCCCTCACTCTCTCCA1750.5749014454664915No Hit
CATAGAGGATCCCATCTGAGTTGGTCACACTGACTGATACAGGAAGGCCT1720.5650459921156373No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1710.561760840998686No Hit
CATAGATCATGGGACTTCAGCATGGCATCCTTTCCCTCACTCTCTCCATC1620.5321944809461235No Hit
CATAGAGAGATTTTGGGCTGAGACGACACTGACTGATACAGGAAGGCCTT1620.5321944809461235No Hit
CATAGAGGATCCCATCTGAGTTGGTCTACAAGCAATGGGGAAAGGATTCT1610.5289093298291722No Hit
CATAGATGCCCTTTTTGTGTACTTCCAATCCTTTCCCTCACTCTCTCCAT1570.5157687253613665No Hit
CATAGACACCATGCCTGGCTAATTTTACACTGACTGATACAGGAAGGCCT1550.5091984231274638No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1480.48620236530880423No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1410.4632063074901446No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT1370.45006570302233906No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGAGCAGAATTACCTCTGGATGGT1370.45006570302233906No Hit
CATAGATGTATACAAGCTGTCACAGACAACACACTGACACATGGTTCTAT1300.42706964520367935No Hit
CATAGATCCTCTCATTGTCCAGTTTGGACACTGACTGATACAGGAAGGCC1290.423784494086728No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCACAAGCAATGGGGAAAGGATTC1280.4204993429697766No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT1260.41392904073587383No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATCTTCACAAAGTCACGAAAGT1240.4073587385019711No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCTTCCTTCTGCTGGCTATTC1210.39750328515111694No Hit
CATAGAACTTCACAAGGGCTTTAGGGTTCACAAAGTCACGAAAGTGGGTC1180.3876478318002628No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATATCCC1090.3580814717477004No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACTGATACAGGAAGGCCTT1090.3580814717477004No Hit
CATAGACAGGGAGGCGTATAAGTGATGGTTCTACACATAGACAGGGAGGC1040.3416557161629435No Hit
CATAGATTGGAACTTTGCCAGCCTTACCATTTTCCCCCAAGTCATCTATG1040.3416557161629435No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1040.3416557161629435No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGATCTATCCAGGAATTTTATTT1020.33508541392904073No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1000.328515111695138No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA970.31865965834428384No Hit
CATAGATTGGAACTTTGCCAGCCTTATAGAGCAGAATTACCTCTGGATGG950.3120893561103811No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACTGATACAGGAAGGCC950.3120893561103811No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAA940.3088042049934297No Hit
CATAGATGCCCTTTTTGTGTACTTCCAATAGAATCCTTTCCCTCACTCTC900.2956636005256242No Hit
CAAGCAATGGGGAAAGGATTCTATGAGACCAAGTCTCTGCTACCGTAAGT870.28580814717477004No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG860.28252299605781866No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGATCTATCCAGGAAT850.2792378449408673No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATCTTGGTCTCATAGACCACCT770.25295663600525625No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA760.24967148488830487No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTACACATGGCTATGCAATCTAT760.24967148488830487No Hit
CATAGACAGAAACCACCCAGACAACCACACTGACTGATACAGGAAGGCCT730.2398160315374507No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATCTACACAAGCAATGGGGAAA700.22996057818659657No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA700.22996057818659657No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGAATGTTCTACACATA690.2266754270696452No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA680.2233902759526938No Hit
CATAGAGCTGGCTTCCTAACTTCCAACATAGAGCTGCCTTCCTAACCATG660.21681997371879105No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC660.21681997371879105No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTAGAGGACAAGCAATGGGGA580.19053876478318002No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAT570.18725361366622864No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTA520.17082785808147175No Hit
CATAGATTGGAACTTTGCCAGCCTTATACGGTAGCAGAATTACCTCTGGA510.16754270696452037No Hit
CATAGATGTATACAAGCTGTCACAGACAACAATGGGCAAGCAATGACAGT500.164257555847569No Hit
CATAGATGAAAGCCTGTTGAATTTATGACAGAGACTTGGTCTCATAGAAT440.1445466491458607No Hit
CATAGATCCTCTCATTGTCCAGTTTGGTCCTTTCCCTCACTCTCTCCATC410.13469119579500657No Hit
CATAGACAGAAACCACCCAGACAACCGAATCCTTTCCCTCACTCTCTCCA410.13469119579500657No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT400.1314060446780552No Hit
CATAGATGAAAGCCTGTTGAATTTATGAACACTGACTGATACAGGAAGGC400.1314060446780552No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCTTGATCTATCCAGGAATTT390.12812089356110382No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTAAATCTGTGAGTTGCTGATG390.12812089356110382No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCAATAAATGGGGGCAAGGA380.12483574244415244No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTATGTGTAGAACCATACA370.12155059132720106No Hit
CATAGATCCCATCCAATAATAATGAGCAAGTACAAGCAATGGGGAAAGGA370.12155059132720106No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCACACTGACTGATACAGGAAGG350.11498028909329829No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCATACGTGAATGTGGATCAGA350.11498028909329829No Hit
CATAGATTGGAACTTTGCCAGCCTTACTTGGTCTCATAGAATCCTTTCCC350.11498028909329829No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTAACAAGCAATGGGGAAA340.1116951379763469No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCACAATGGGCAAGCAATGACAG330.10840998685939553No Hit
CATAGACCTGGGCTTAGGGGCTATACACACTGACTGATACAGGAAGGCCT320.10512483574244415No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCTTTCCCTCACTCTCTCCATC310.10183968462549277No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGCAAGCAATGA310.10183968462549277No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)