FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30440
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA15535.101839684625493No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA14854.878449408672799No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT14264.684625492772668No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG9463.107752956636005No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC7342.4113009198423128No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTGGAAGTACACAAAAAGGG6422.109067017082786No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG6382.0959264126149804No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG5991.9678055190538766No Hit
CATAGAAAGGCCTTCCTGTATCAGTCATCACTTATACGCCTCCCTGTCTA5631.849540078843627No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGAAGTACACAAAAAGGGCATCTA5311.7444152431011828No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT5291.7378449408672798No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT5271.731274638633377No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG5181.7017082785808146No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT4351.4290407358738502No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA4101.3469119579500657No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGGAAGTACACAAAAAGGGC3821.254927726675427No Hit
CATAGAATCCTTTCCCCATTGCTTGTGTAGAACCATGTCGTCAGTGTATG3641.1957950065703022No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAACACTGAGACATGGAAGTACACA3211.054533508541393No Hit
CATAGACCAGACTTTTGAAAGAAGCACATCACTTATACGCCTCCCTGTCT2970.9756898817345597No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA2960.9724047306176085No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAACCCCTTAAGAAAATTTAATTGT2870.942838370565046No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2750.9034165571616295No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCAACCCCTTAAGAAAATTT2720.8935611038107752No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT2600.8541392904073587No Hit
CATAGAATCCTTTCCCCATTGCTTGTGACTCGTCTCAGCCCAAAATCTCT2590.8508541392904073No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGGTTTCTCTCTATCTGATTTCT2580.847568988173456No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCGTATGGAAGTACACAAAAA2490.8180026281208936No Hit
CATAGACTTCCTTGCCCCCATTTATTCGACATGGAAGTACACAAAAAGGG2360.7752956636005256No Hit
CATAGAATCCTTTCCCCATTGCTTGTCAGTGTAAGGCTGGCAAAGTTCCA2330.7654402102496715No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGCTTCCACATGATGGACATCTATG2260.7424441524310118No Hit
CATAGAATCCTTTCCCCATTGCTTGTGTGGAAGTACACAAAAAGGGCATC2180.7161629434954008No Hit
CATAGATGAAAAGTCAAGCCAGCACAACCCCTTAAGAAAATTTAATTGTC2160.709592641261498No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCCCTAAAGCCCTTGTGAAG2110.6931668856767411No Hit
CATAGAAAGGCCTTCCTGTATCAGTCATAAATTCAACAGGCTTTCATCTA2060.6767411300919842No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTTGGAAGTACACAAAAAGGGCA2010.6603153745072273No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGGTCTCATAAATTCAACAGGCTT1980.6504599211563732No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG1970.6471747700394218No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTATGCAAGACTAGGCAATTT1970.6471747700394218No Hit
CATAGAGTTCAAATGGCCAATCAGGTACTTGGTCTCATAAATTCAACAGG1950.640604467805519No Hit
CATAGACCAGACTTTTGAAAGAAGCACAACACTGAACATAGCCTTTGGGG1940.6373193166885677No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT1940.6373193166885677No Hit
CATAGACATGCTAACATTTCTGGGGATAAGGCTGGCAAAGTTCCAATCTA1920.6307490144546649No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGTAGAACCATGTCGTC1890.6208935611038108No Hit
CATAGACTGTCATTGCTTGCCCATTGAACATAGCCTTTGGGGTTTCTATG1790.588042049934297No Hit
CATAGATATGCCCATGGTTAGGAAGGCAACCCCTTAAGAAAATTTAATTG1770.5814717477003942No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATACTGGGGACTGTGACTCTGTTT1760.5781865965834428No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGTCCATCACTTATACGCCTCCCT1750.5749014454664915No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGACCAACTCAGATGGGATC1670.5486202365308804No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG1660.545335085413929No Hit
CATAGAATCCTTTCCCCATTGCTTGTAGACCAACTCAGATGGGATCCTCT1640.5387647831800263No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCGTCTCAGCCCAAAATCTC1560.5124835742444153No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATGCCATGCTGAAGTCCCATGATC1550.5091984231274638No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAAAATTAGCCAGGCATGGT1530.502628120893561No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTGGAAGTACACAAAAAGGGCAT1520.49934296977660975No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA1380.4533508541392904No Hit
CATAGACCATCCAGAGGTAATTCTGCTCTGGAAGTACACAAAAAGGGCAT1300.42706964520367935No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGCCATGCTGAAGTCCCATG1300.42706964520367935No Hit
CATAGACATGCTAACATTTCTGGGGATAGAACCATGTGTCAGTGTGTTGT1300.42706964520367935No Hit
CATAGAATCCTTTCCCCATTGCTTGTGGAACTTTGCCCCAAAAGAGGTTC1300.42706964520367935No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT1280.4204993429697766No Hit
CATAGACCCACTTTCGTGACTTTGTGAAGATGCAAGACTAGGCAATTTAC1250.4106438896189225No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCCAAACTGGACAATGAGAG1250.4106438896189225No Hit
CATAGAATAGCCAGCAGAAGGAAGCAACCCCTTAAGAAAATTTAATTGTC1220.4007884362680683No Hit
CATAGACCCACTTTCGTGACTTTGTGAACCCTAAAGCCCTTGTGAAGTTC1120.3679369250985545No Hit
CATAGAAGTTCTGATCCACATTCACGTATACGCCTCCCTGTCTATGTGTA1110.36465177398160314No Hit
CATAGACATGCTAACATTTCTGGGGATATAGACATGCTAACATTACTGGG1100.36136662286465177No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAAGGCTGGCAAAGTTCCAA1070.35151116951379763No Hit
CATAGATGACTTGGGGGAAAATGGTAAGGCTGGCAAAGTTCCAATCTATG1050.34494086727989487No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCACTGGGGACTGTGACTCT1030.3383705650459921No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA1010.33180026281208935No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGCTCATTATTATTGGATGG970.31865965834428384No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG960.31537450722733246No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT960.31537450722733246No Hit
CATAGACCATCCAGAGGTAATTCTGCTCTATAAGGCTGGCAAAGTTCCAA900.2956636005256242No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATTGGAAGTACACAAAAAG870.28580814717477004No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCAGTGTATGCAAGACTAGG860.28252299605781866No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT860.28252299605781866No Hit
CATAGAATCCTTTCCCCATTGCTTGTGTAGAACCATGTCGTCAGTGTAGA850.2792378449408673No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA850.2792378449408673No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA750.2463863337713535No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT740.24310118265440211No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGGTTGTCTGGGTGGTTTCT730.2398160315374507No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGTCTATGAGACCAAGATGCAAGA690.2266754270696452No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA680.2233902759526938No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA670.22010512483574243No Hit
CATAGAATCCTTTCCCCATTGCTTGTGTAGATGCAAGACTAGGCAATTTA660.21681997371879105No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATGTTGGAAGTTAGGAA660.21681997371879105No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCTCTAACACTGGGGACTGTGACT600.19710906701708278No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGTCTGTGACAGCTTGTATACAT540.1773981603153745No Hit
CATAGACATGCTAACATTTCTGGGGATCTCATAGACATGCTAACATTACT510.16754270696452037No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA500.164257555847569No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTATAAGGCTGGCAAAGTTC490.1609724047306176No Hit
CATAGAGCAGGAATTAGACTCTTGACATCTATGTGTAGAACCATGTCGTC470.15440210249671485No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT420.13797634691195795No Hit
CATAGAATCCTTTCCCCATTGCTTGTACTTGCTCATTATTATTGGATGGG410.13469119579500657No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCGGTTGTCTGGGTGGTTTCTG410.13469119579500657No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTCATAAATTCAACAGGCTT390.12812089356110382No Hit
CATAGATGGAGAGAGTGAGGGAAAGGACCAAACTGGACAATGAGAGGATC390.12812089356110382No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCAAGCAACCCCTTAAGAAA380.12483574244415244No Hit
CATAGATGCATCAGCAACTCACAGATTTAGAGCAGGAATTAGACTCTTGA380.12483574244415244No Hit
CATAGAATCCTTTCCCCATTGCTTGTTACGGGAGCAGGAATTAGACTCTT370.12155059132720106No Hit
CATAGACTTCCTTGCCCCCATTTATTGATTGGAACTTTGCCCCAAAAGAG360.11826544021024966No Hit
CATAGAAGTTCTGATCCACATTCACGTATGGAGCAGGAATTAGACTCTTG340.1116951379763469No Hit
CATAGAATCCTTTCCCCATTGCTTGTTAGAGCAGGAATTAGACTCTTGAC340.1116951379763469No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGAGCAGGAATTAGACTCTT340.1116951379763469No Hit
CATAGACTGTCATTGCTTGCCCATTGTGAGCAGGAATTAGACTCTTGACA320.10512483574244415No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCAAGTAAGGCTG320.10512483574244415No Hit
CATAGAATCCTTTCCCCATTGCTTGTATGGTTCTACACATAGATTGGAAC320.10512483574244415No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA310.10183968462549277No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGTATAGCCCCTAAGCCCAG310.10183968462549277No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)