FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155083
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1610610.385406524248305No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG86655.5873306551975395No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC73654.74906985291747No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG66924.315108683737096No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG51663.3311194650606444No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA51063.2924305049554112No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA50523.2576104408607005No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG47293.0493348722941906No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG40062.5831329030261214No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT34672.2355770780807696No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT33502.1601336058755636No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG30001.9344480052616984No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA29471.900272757168742No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT27991.8048399889091646No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA26991.7403583887337748No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC17931.1561550911447418No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC17891.1535758271377263No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA15070.9717377146431265No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA14030.904676850460721No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG13350.8608293623414559No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT12450.8027959221836048No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT11640.7505658260415391No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG11540.7441176660240001No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA11520.7428280340204922No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA9960.642236737746884No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG9480.6112855696626968No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC9340.6022581456381422No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC9220.5945203536170953No Hit
CATAGATGGCCAAGATACGAGCACATTGCTTCTTGTGGTAACTGGTCTAT8380.5403558094697678No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCAGTGAAGCAGAGCTTCCCA8380.5403558094697678No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC8260.5326180174487211No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGACATGCCAGGAATCAATGTT8200.5287491214381976No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG8180.5274594894346898No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC8170.5268146734329359No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA7870.507470193380319No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA7430.47909828930314735No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG7220.46555715326631547No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTGTCTGTTTCCCCACTCAAATAC6860.4423437772031751No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACTGTGTGCTTGAACCAG6750.4352508011838822No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT6160.3972066570804021No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT6080.39204812906637093No Hit
CATAGACCAGCAGACACTCCCATCATACACTGCCCTCTCTGCTGTTCCTT6030.38882404905760143No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC5930.3823758890400624No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA5570.35916251297692203No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT5540.3572280649716603No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG5290.34110766492781286No Hit
CATAGAAAAAACAGTTGGCCAGGCATCATTTATTTTAAAGGACTGGAAGC5140.33143542490150435No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGATCATTGTTCACTGC4850.31273576085064125No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG4720.3043531528278406No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTATCTCCCAAGTATTAGAGCA4590.29597054480503987No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG4340.27985014476119235No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA4210.2714675367383917No Hit
CATAGATCCACGTGAGAATAAAGCATACAACACTGACGACACTGGTGCAT3680.23729228864543506No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGGCTCAGGTATGTCTTTA3630.23406820863666553No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGACGCTATACCA3580.23084412862789602No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG3540.22826486462088044No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA3530.22762004861912652No Hit
CATAGATCACGTAGAAACTGGAGAGGCCAGTGCAGTGGGGAGGCAGGCTG3430.22117188860158754No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACAAATGAGAAACCTGGA3430.22117188860158754No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT3410.21988225659807975No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA3390.21859262459457193No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTACACTGCCCTCTCTGC3370.21730299259106414No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGAGAGCTTCACAACCTTGAAAGG3330.21472372858404856No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGGCTCAGGTATGTCT3310.21343409658054077No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTAGGCTAATCTGAAATCTTCG3190.20569630455949395No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG3150.20311704055247837No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3150.20311704055247837No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA3030.19537924853143154No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGACCACGCTGTCCTTCTCT2770.17861403248583016No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT2740.17667958448056847No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG2700.17410032047355287No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2650.17087624046478336No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGCCCTCTCTGCTGTTCCTTC2610.16829697645776778No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTACACTGACGATCATTGTTCACT2580.16636252845250607No Hit
CATAGAAGCCATGAACACAGGATTGAAAAAAGATTGATAGACTACAGGAA2570.16571771245075217No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGGCTAATCTGAAATCTT2560.16507289644899828No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCGTCAGCCCTGCAGTCTT2420.1560454724244437No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT2360.1521765764139203No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA2330.15024212840865858No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG2310.1489524964051508No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGACATTGCTTCTTGTG2300.14830768040339687No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACAAATGATTTTTCCACTA2290.14766286440164297No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTAACGCTATACCACACTAC2290.14766286440164297No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2290.14766286440164297No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAACACTGGCTCAGGTATGTCTTTAT2250.1450836003946274No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC2170.13992507238059618No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA2150.1386354403770884No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA2080.13412172836481112No Hit
CATAGAGAAGACTCCCTCAACCCACCCTGACGATCATTGTTCACTGCAGC2050.1321872803595494No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTCCCAAGTATTAGAGCAAGTT2040.13154246435779549No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCATAGATTGTCTGCCTC1990.128318384349026No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGACGACATTGCTTCT1940.1250943043402565No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGATCATTGTTCACTGCA1910.12315985633499481No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGCAACCCCTGCAGTCTTTGGA1880.12122540832973311No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACTTGCATGACAGAGCGAGA1870.12058059232797921No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG1860.11993577632622532No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGCATGACAGAGCGAGAC1790.11542206431394801No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATTGCTTCTTGT1790.11542206431394801No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG1760.11348761630868631No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGCTGAAGTGATGGGCTA1730.11155316830342463No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC1690.10897390429640902No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC1670.10768427229290121No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1650.10639464028939342No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA1650.10639464028939342No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)