FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808390

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808390
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50087
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2373547.38754567053327No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA15993.1924451454469227No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG15963.186455567312876No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA11692.3339389462335536No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG11462.2880188472058616No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA8391.67508535148841No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC6111.2198774133008565No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG5551.1080719547986502No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC5311.0601553297262762No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC5171.0322039651007249No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG3640.7267354802643401No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG3140.6269091780302274No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT2960.5909717092259469No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGACATGGTTCTACACA2870.5730029748238066No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA2780.5550342404216664No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT1790.3573781619981233No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC1790.3573781619981233No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA1730.34539900573002974No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1730.34539900573002974No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAAGCATGT1610.3214406931938427No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT1610.3214406931938427No Hit
CATAGATCATGCAAAGAACACAGGCCAAGCTGGTCTATGAGACCAAGTCT1590.3174476411044782No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA1560.31145806297043144No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT1560.31145806297043144No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT1420.2835066983448799No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1410.28151017230019765No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1390.2775171202108332No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA1390.2775171202108332No Hit
CATAGAAGGAGGGGAAACTGAGGCCAATTTGTGCTGACTTCCCAAAGCTG1280.25555533371932837No Hit
CATAGACCATTTGCCGCGTTCTGAAGCATGGTTCTACACATAGATCATTT1240.24756922954059937No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGTGCAGCTATATTGGAGGAA1200.23958312536187035No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAAGGATTGA1110.22161439095973007No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG1100.2196178649150478No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTAGCATGTTGAGATGAATAA1090.21762133887036558No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1040.20763870864695433No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1040.20763870864695433No Hit
CATAGATCAACAATGGATGAGCAAAAGGAAAGCAATCACCGCCAGTCTAT1010.20164913051290753No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA990.19765607842354305No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA970.19366302633417853No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT950.18966997424481402No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG940.18767344820013176No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG900.17968734402140277No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC890.1776908179767205No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGTGCAGCTATATTGGAGGAAA870.173697765887356No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG870.173697765887356No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG860.17170123984267374No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC860.17170123984267374No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG840.16770818775330923No Hit
CATAGATCACCTACACAGACAGCTTTCCCATGGGTCCTTTTCACATCATC820.16371513566394474No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCACCATGGGTCCTTTTCACATCATC820.16371513566394474No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTATGTCAGAG810.1617186096192625No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG780.15572903148521572No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG770.1537325054405335No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG740.14774292730648672No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC730.14574640126180446No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA700.1397568231277577No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT690.13776029708307544No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTTCTACACATAGATTAAGTGCA690.13776029708307544No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG670.13376724499371095No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC670.13376724499371095No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGCTAGTCCGTCACCCCTAAT670.13376724499371095No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA670.13376724499371095No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA660.1317707189490287No Hit
CATAGATCATGGGACTTCAGCATGGCGGTATTTACAGATTTGGACCTGCG650.12977419290434644No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA600.11979156268093517No Hit
CATAGATGTGCCTCTCCAACATTCATGGAGACAGCCGCTCACCTCTATGA580.11579851059157066No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG580.11579851059157066No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA570.11380198454688842No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA560.11180545850220616No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT550.1098089324575239No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC550.1098089324575239No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG550.1098089324575239No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGTACACTGACGACATGGTTC540.10781240641284165No Hit
CATAGATCATGCAAAGAACACAGGCCGGGCACGGTGGCTCACGCCTGTAA510.10182282827879491No Hit
CATAGACTCAAGCAATCCTCCCACCTACACATAGAGTCTCGCTAATAGTT510.10182282827879491No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG510.10182282827879491No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)