FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86730
Sequences flagged as poor quality0
Sequence length150
%GC34

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA45075.196587109420039No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT43505.0155655482532No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG37304.30070333218033No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT30603.5281909373919063No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA25482.937853107344633No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT23162.670356278104462No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG20912.410930473884469No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA19552.254121987778162No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT17301.994696183558169No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT17201.9831661478150582No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT16721.9278219762481266No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG15361.7710134901418195No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA14341.6534071255620892No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG13791.58999192897498No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA11771.3570852069641415No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA11601.3374841462008533No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG10871.2533148852761444No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT10331.191052692263346No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC9141.0538452669203275No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8380.9662169952726853No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7380.8509166378415773No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG6720.774818401937046No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA6670.7690533840654906No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC6410.7390752911334025No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5920.6825781159921596No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG5920.6825781159921596No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGTTTACTCGGAGATTTGAC5880.6779661016949152No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGATAGCGAGAAGAGTGGAGGC5810.6698950766747377No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGGAATCTTTGGGAGGCTA5590.6445289980398939No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5040.5811138014527845No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATCATAGGGCACTGAG4960.5718897728582959No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGATAGCGAGAAGA4760.5488297013720743No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT4750.5476766977977632No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT4730.545370690649141No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGCCCCAGGTAGCAAAA4110.473884469041854No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT3910.4508243975556324No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT3860.44505937968407705No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC3860.44505937968407705No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG3820.44044736538683266No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT3710.4277643260694108No Hit
CATAGATGGGATTATAGGTGTGAGCCAGTGTAGGAATCTTTGGGAGGCTA3650.42084630462354433No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA3550.40931626888043354No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT3490.40239824743456704No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA3420.39432722241438944No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG3270.3770321687997233No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3200.3689611437795457No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGAACAATGCCTCACACACAGGT3190.36780814020523467No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCTGTTTACTCGGAGATTTG3000.3459010722933241No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG2930.3378300472731465No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT2840.3274530151043468No Hit
CATAGATACCTGTCCTCTGCCTCGAGTACGGAAGACACAGCACACTCTTC2820.32514700795572465No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAGAACCATGTCGTCA2770.31938199008416923No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGTAGCTTACACTGCACATGGG2750.3170759829355471No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT2730.31476997578692495No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA2720.31361697221261386No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGGGAAAGGTATGTGGCACATCTAT2710.3124639686383028No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTAGAGGAGAATGATATT2690.3101579614896806No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCATAGAGCAGCATTCTCTCAGGG2670.30785195434105844No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAAGAAGTGTATTAATTATCTA2660.30669895076674736No Hit
CATAGACCACACACACAACTGAGAGTGGCGCCATGCTGAAGTCCCATGAT2580.29747492217225874No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGCAACATATCAGAAGCAT2560.29516891502363657No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC2550.2940159114493255No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT2510.28940389715208115No Hit
CATAGATCCCATACTCCTCCATTACCCTATAGACCTTTTTCTGTAGTCAA2500.28825089357777006No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGGTAGCAGAGACCTTTTTCTG2500.28825089357777006No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGAAGCAGAGGTAG2500.28825089357777006No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG2440.2813328721319036No Hit
CATAGAGTCCTTCCCTCTCACACATGTCCCCCCAGGTAGCAAAACAGAGT2440.2813328721319036No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAGGAGCTG2370.273261847111726No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG2340.26980283638879277No Hit
CATAGAGTGCTCTCTTTCCCCACCCTATCTGTTTACTCGGAGATTTGACT2320.26749682924017065No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTTGAAGCAGAGG2300.2651908220915485No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTACGGAAGACACAGCA2230.25711979707137095No Hit
CATAGAGGCACGATCTTGTTTCACTGTACGATAGCGAGAAGAGTGGAGGC2210.2548137899227487No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC2180.2513547791998155No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT2180.2513547791998155No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGGGAAAGGTATGTGGCAC2180.2513547791998155No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACAGGGCAGAG2120.24443675775394905No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGCTTACACTG2080.23982474345670474No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGTAGAGAGTTCTGTAGA2030.23405972558514931No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC2020.23290672201083823No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTTCAGCTCTTTGAGGCATC2020.23290672201083823No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA2020.23290672201083823No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGTAGCAGGAAACATTGGAA2010.23175371843652715No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT2000.23060071486221606No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG1990.229447711287905No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT1980.22829470771359392No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGCAACATATCAGAAGCATCT1950.2248356969906607No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGAAGTGTATTAAT1900.21907067911910524No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1890.2179176755447942No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGGCAACATATCAGAAGCATCTA1890.2179176755447942No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGGAAGACACAGCACACTCTTCTA1820.20984665052461662No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC1790.2063876398016834No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1680.1937046004842615No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGTCACTGACAGGTCTTAA1620.18678657903839502No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATAGGAGGAGCTGACTTACTGT1580.1821745647411507No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGAGGAGAATGATATTGTTGC1560.17986855759252854No Hit
CATAGACCCCCTTGAGTTCACTGGACGGCAACATATCAGAAGCATCTATG1550.17871555401821745No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATACGATAGCGAGAAGAGTGGAG1530.17640954686959529No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACGGCAACATA1530.17640954686959529No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1500.17295053614666206No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1490.17179753257235097No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT1460.16833852184941772No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG1410.16257350397786233No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA1410.16257350397786233No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT1400.16142050040355124No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTCTTCAGCTC1400.16142050040355124No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACTGTCTTCAGCTCTTTGAGGC1400.16142050040355124No Hit
CATAGAGTGAAACCCTGTCTCTACCAACCAAAATGTCAGGGGATCCTCTA1390.16026749682924016No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAACTTATCTGG1380.1591144932549291No Hit
CATAGATATTCTGCCCCCTCCTCTCCGTCTTGCTCCTTCTCACACAAATC1370.15796148968061802No Hit
CATAGATATTCTGCCCCCTCCTCTCCATAGAAGTGTATTAATTATCTATG1330.15334947538337368No Hit
CATAGATATTCTGCCCCCTCCTCTCCATAGATCGGTAAGGAATCTTTGGG1320.1521964718090626No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1300.14989046466044045No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAACGGCAACATATCA1280.14758445751181828No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC1280.14758445751181828No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTCTCATAGATGGGTAGAGAGT1270.14643145393750723No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTGGTCTCATAGGGCACTGAGA1250.14412544678888503No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTAGATGGATCATCTATGTGT1230.1418194396402629No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCCCCAGGTAGC1170.13490141819439638No Hit
CATAGATCACCAGATGCCAGTTGTGATCTACAGTTTCAATACTATGCCTC1160.13374841462008533No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCCCAGAGGAGAATGATATTGTTG1160.13374841462008533No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT1140.13144240747146316No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGCATT1140.13144240747146316No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1130.13028940389715207No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG1120.12913640032284102No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT1100.12683039317421882No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATGGGTAGAGAGTTCTG1100.12683039317421882No Hit
CATAGATATTCTGCCCCCTCCTCTCCTTCCACTACCCACCTGCCTCTATG1090.12567738959990776No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGGCATTCTCTCA1080.12452438602559668No Hit
CATAGATATTCTGCCCCCTCCTCTCCACTGACAACAATGCCTCACACACA1080.12452438602559668No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT1070.1233713824512856No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAAGGAGGAGCTGACTTACT1070.1233713824512856No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGAAGCAGAGGT1040.11991237172835237No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGGGGAAAAGGG990.11414735385679696No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG990.11414735385679696No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG960.11068834313386372No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAAACATTGGAA960.11068834313386372No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT960.11068834313386372No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT950.10953533955955262No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCAGGGCAGAGA940.10838233598524155No Hit
CATAGACGAATTGCCCATGTCAGTAAATCACACATAGGAGGAGCTGACTT940.10838233598524155No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG940.10838233598524155No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAATCTTTGGGAGGCTATTAGT930.10722933241093047No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCCAGAGGAGAATGATATTGTTGC920.1060763288366194No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT910.10492332526230831No Hit
CATAGATGGGATTATAGGTGTGAGCCAGGGCAGAGAGTGTGTTGTATTCT910.10492332526230831No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)